AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00546 ATGGACCCGGTGAACCAAGAGGTAAAGCCCGATGAGACACTAACTGGTATTGACACGCGAAAACGAGGCCGCCCACGAAAGGATCCAGGTGAGAAACGGGCCCAAAGAGCCCGTTCACAAGCGGATGTTCTCCCGCCACCTGGTTTTGCACCACTGCCCAACCGCACTCCTCCAGTTGACCTGATAAATGATCCAACTCAAGTTATGGTTGGACAGACTGTAACCGGTGTTGTTCAGGGAACTTTTGATGCGGGTTACTTGCTTGCGGTTAGGATTGGGAACTCAAACATTACCCTAACGGGTGCAGTTTTCAAACCGGGCCAAGCTGCACCGTTGACACCTGAAAATGACGTGGCACCTCATGTTGAAATGATCAAACGAACCGAAATTCCGATTCCAACAGAAGTCCAGCCCCCCAAACATAGGCGTAAACGAAGATCAAAAGAGAAAAGTATGCAACTTGTTACTTATGGTGGAAACGGGTCAGACGCTGTGGATATGAATCCACCACCTAAAAGCAACCGCGTGTTACCCCCCTCGGCCCAGGTTAGCGGGAGAGCCACCTTTGTCCCTGTCGTTCTTCGACCAATTAACCCATCAAACAGTTTATCCAACAACCAACCTGCACCTCATTTGCGGGCCTCACTAGGCAAGCGGGTGCACTCGGTTCTGCCATTGGCGGTTTACCCACCAAACGTGCCAGCAAGTAAACCGTCTGATTCTCAAAGTAGCTCACAGTTTACTGTTACACCCCCCGGGTTTGGAAATGAGAATGCTCCTTTTAAAAACGCAGAAGGGAGTAAAACAGTAAAATCAAGTAATGTGCAAGATGGAGTTGTGAAAACCGAATCAGATATCGGTGATATGAATGAGCCTCTTTTCGTTGAACCCCTGCAAACTCGACACACAGTTCCGCATTTCCAGCCTCCACCAGTATTTGGAGGTGGGATGCATAGTGCTACCGGGAGAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAATATGGGTGATGACCAGGCAAGGAGGATGTAA 1032 49.52 MDPVNQEVKPDETLTGIDTRKRGRPRKDPGEKRAQRARSQADVLPPPGFAPLPNRTPPVDLINDPTQVMVGQTVTGVVQGTFDAGYLLAVRIGNSNITLTGAVFKPGQAAPLTPENDVAPHVEMIKRTEIPIPTEVQPPKHRRKRRSKEKSMQLVTYGGNGSDAVDMNPPPKSNRVLPPSAQVSGRATFVPVVLRPINPSNSLSNNQPAPHLRASLGKRVHSVLPLAVYPPNVPASKPSDSQSSSQFTVTPPGFGNENAPFKNAEGSKTVKSSNVQDGVVKTESDIGDMNEPLFVEPLQTRHTVPHFQPPPVFGGGMHSATGRMTELLQAVQQNMGDDQARRM 343
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00546 343 MobiDBLite consensus disorder prediction 235 253 - -
Dapi23g00546 343 MobiDBLite consensus disorder prediction 233 273 - -
Dapi23g00546 343 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 340 IPR045881 -
Dapi23g00546 343 MobiDBLite consensus disorder prediction 1 57 - -
Dapi23g00546 343 MobiDBLite consensus disorder prediction 13 38 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00546 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251773 Dapi7g00529 Dapi23g00546
256692 Dapi23g00546 Dapi16g01758
381595 Dapi16g01758 Dapi23g00546
387166 Dapi23g00546 Dapi7g00529
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1900932 Dapi Dapi16g01758 Dapi-Chr16:60333589 Dapi23g00546 Dapi-Chr23:12237393
1917864 Dapi Dapi23g00546 Dapi-Chr23:12237393 Dapi32g01984 Dapi-Chr32:68787312
2035341 Dapi Dapi23g00546 Dapi-Chr23:12237393 Dapi7g00529 Dapi-Chr7:11426196