Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00574 | ATGAATAGTAATCCTTCTACGCCGATGAACGCAAACGCTCCGTCGTCAAGCTCCGGTGGCGCCGGATCACCTGATTCAAATACTCCGAGGAGAAATTCGAAGCGACCTAAATATTCTAGGTTTACACAGCAAGAATTACCAGCTTGTAAGCCAATTCTTACACCGAAATGGGTGATTTCAGCATTCATGCTTGTGACAATTGTCTTTATACCTATAGGACTTACTTCACTCCTTGCTTCTCGTGATGTGGTTGAAATTGTTGACCGGTATGATAATGCCTGTGTAACGGGCTCAAAGAGTCAAAAGGTCCAACATATACAAAACCAGGCCTCAAATAAAACCTGCGTCAGAACCTTGACAGTCAGAAAGAGAATGAAGCAGCCTATTTATGTATATTATCAGCTTGACAATTTCTATCAGAATCACCGCAGGTATGTCAAGAGCCGAAGTGATCAGCAACTGAGAAACCGTGGTGATGAGAATGACACAAGTACATGTAAGCCTGAACATGAAGCAAATGGGATGTCAATAGTGCCATGTGGACTTGTAGCCTGGAGTTTGTTCAATGACACTTATAGGCTCTCCACCAGTAACAACCGTCAATTAACCATAAACAAGCGGGAGATTTCATGGAAGAGTGACAGGGATGAAAAGTTTGGCAGTGATGTCTTCCCAAAAAATTTCCAAAACAGTAGTTTTATTGGTGGTGGGAGTCTCATTGCAGACGTACCATTAAATCAGCAAGAAGACCTTATTGTTTGGATGCGAACTGCTGCTCTCCCAACGTTTAGGAAACTGTACGGGAAAATTGAGCAGGATATTGAGGCAGGTGAAACAATAAATGTGGTATTGGAGAACCGTTACAACACTTACAGTTTCAGTGGCAAGAAGAAACTTGTGCTTTCAACTACTAGCTGGCTTGGCGGGAAAAATAACTTTATTGGCATCGCTTATCTGGCAGTTGGTGGTTTGTGCTTCTTACTAGCTGCCACTTTCACCATCATATATTTTGTTAAGCCAAGGCATCTTGGAGATCCAAGTTATTTGTCATGGAACCGAAACCCAGGTGGTCACTGA | 1077 | 42.62 | MNSNPSTPMNANAPSSSSGGAGSPDSNTPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLTSLLASRDVVEIVDRYDNACVTGSKSQKVQHIQNQASNKTCVRTLTVRKRMKQPIYVYYQLDNFYQNHRRYVKSRSDQQLRNRGDENDTSTCKPEHEANGMSIVPCGLVAWSLFNDTYRLSTSNNRQLTINKREISWKSDRDEKFGSDVFPKNFQNSSFIGGGSLIADVPLNQQEDLIVWMRTAALPTFRKLYGKIEQDIEAGETINVVLENRYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFLLAATFTIIYFVKPRHLGDPSYLSWNRNPGGH | 358 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00574 | 358 | MobiDBLite | consensus disorder prediction | 148 | 167 | - | - | |
| Dapi23g00574 | 358 | PIRSF | Lem3-Cdc50 | 7 | 354 | IPR005045 | GO:0016020(InterPro) | |
| Dapi23g00574 | 358 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 77 | 341 | IPR005045 | GO:0016020(InterPro) | |
| Dapi23g00574 | 358 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 29 | 350 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Dapi23g00574 | 358 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Dapi23g00574 | 358 | MobiDBLite | consensus disorder prediction | 148 | 170 | - | - | |
| Dapi23g00574 | 358 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00574 | K26935 | cell cycle control protein 50 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 79393 | Dapi23g00574 | Dapi28g01313 | |
| 251789 | Dapi7g00553 | Dapi23g00574 | |
| 387182 | Dapi23g00574 | Dapi7g00553 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:12735482 | Dapi26g01764 | Dapi-Chr26:45501114 | dispersed | |
| Dapi | Dapi-Chr1:23375522 | Dapi23g00574 | Dapi-Chr23:12735482 | wgd | |
| Dapi | Dapi-Chr12:101637200 | Dapi23g00574 | Dapi-Chr23:12735482 | wgd | |
| Dapi | Dapi-Chr17:23489492 | Dapi23g00574 | Dapi-Chr23:12735482 | wgd | |
| Dapi | Dapi-Chr23:12735482 | Dapi28g01283 | Dapi-Chr28:90689768 | wgd | |
| Dapi | Dapi-Chr23:12735482 | Dapi28g01313 | Dapi-Chr28:91288085 | wgd | |
| Dapi | Dapi-Chr23:12735482 | Dapi7g00553 | Dapi-Chr7:11930070 | wgd |