AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00600 ATGGACACCGCTAAACAGCAATTCTTGAAGGAATTCGGTGAATCTTACGGTTATCGGGACGCCCCTAAGAATATTGATGATATTCGGGCTACTGAGTTCAAAAGACTTGATGGAAATGTGTATTTGGATCATGCTGGTGCAACTTTGTATTCTGAATTACAGATGGAAGCCATATTTAAAGATCTTCACACCACTGTATATGGCAATCCCCATAGTCAAAGCAGTTCTAGCTCGGCCACTTCAGACATCATAGAAGATGCTCGTCATCAGGTTCTGAAACTGTGTAACGCGTCTCCAAAAGAATATAAGTGTATATTCACTTCTGGGGCAACTGCAGCTCTTAAACTTGTTGGTGAGGCGTTTCCTTGGAGTAATCAGAGCACGTTTATGTATACGATTGAGAATCACAACAGTGTTCTTGGAATTAGAGAATATGCTCTCAATAAAGGCGCTGCAGCGTTAGCAATAGACTTTAAGGAAGCTGCAGAGTCATCCTCCATAAAGGTTTCACACCATCCTGTACAAAAGAGAAGTGAAGCTAGGGTTTTGGACAAGCAGCCTACTGGTGAAATATACAATTTATTTGCCTTCCCTTCAGAGTGTAATTTCTCAGGAGTGAGGTTCAACCTTGATTTAATAGACATAGTTAAGGAAGATTCAGAAAAATTATTGGAAGGCTCTCAACATTGCAGGGGAAATTGGATGGTTTTGCTGGATGCTGCTAAAGGATGTTCTACAGACCCTCCAAATTTATTAACATATAAGGCGGATTTTGTTGTTATGTCATTTTACAAGCTTTTTGGATATCCAACTGGACTTGGAGCTTTGATTGTTCGAAATGAAGCTGCAAAGTTACTAAAGAAGAGCTACTTTAGTGGAGGCACAGTGGCTGCGGCAATTGCTGACATTGACTATGTGAAAAGAAGAGAAGGTATAGAAGAATCATTCGAAGATGGAACACTATCCTTCTTGAGTATTGCATCCATTCGCCATGGATTTAATATACTCAATACGTTGACCCCATTATCCATATCAAGGCACACATCATCACTTGCAACATATACAAGAAATATGCTTTTGGAATTAAGGCATACAAATGGGCAGGAGGTATGCAAAATATATGGCATGGAATATTTAAAGGCAGCTTATAGTGGACTTGGTCCTGTGGTTTCTTTCAACTTGAAACGGACTGATGGTTCTTGGGTTGGCCCTCGTGAACTGGAAAAATTGGCTTCTTTGTCTGGAATTCAGCTACGGACTGGATGCTTTTGCAATCCTGGTGCTTGTTCCAAGTATCTTGGTTTATCTCATGCAGATCTTCTTTCCAACATTGAGGCTGGTCATGTTTGCTGGGATGACCTTGATATATTACACGGAAAACCAACTGGAGCTGTTAGAATATCTTTTGGTTATATGTCAACGTTCGAAGATGCATGGAGATTCATGAACTTCATTGTAAATTCCTTTGTCTCATTACCCACCAGTACATTGAGATCCAGATCTATCCAATTTGCCACTGAAGGTGGCAAGACAACAACAGAACATTATCTTGCATCAATTGTTGTGTATCCAATAAAATCATGTGCAGGATTCAAAGTGGACAGCTGGCCTCTAAGCAGCACTGGATTGTTATATGATCGAGAATGGCTTCTCAAAAGCATGAATGGTGAGATTCTTACACAGAAGAAGGTACCTGAAATGAACCTTATTGGTACAAAGATTGACCTCGAAACAGGAATGCTTCATGTGGAATCTCCTCGGTGCAAAGAGAAGCTTCTTATCGAACTTAAGTCAAATTTATTTGCTGCTGTAGAAGAAATCAATGTACATGCCCAAAGGTATGAAGTTATGGGCTATGATAACGAAATCGACACTTGGTTTAGTAACGCAGTTGGCCGGCCTTGTTATTTGTTAAGATCTAGTTCCAGAAGTTGTACCTGTTTGAACAGAAGCCAAAACCCGAGCATATGTAGAGACATAAAGACCAGATTAAACTTTGTTAACGAAGCTCAGCTTTTATTGATATCCGAGGAAAGCGTATCTGACCTCAACCATAGATTAAACTCAATTGTGAAAGAAGAGGGGTCTGTTTTACCTATAAAAGTTGACGCAATGAGATTCCGGCCCAATGTTGTGATATCGGGTGGCGGGCCATACGCTGAAGACGGTTGGGGTGGCCTTAAGATTGGAAAAAATCACTTCATGTCGTTAGGCGGCTGCAATCGTTGCCAGATGATCAATTTGAATTATGAAGCCGGTGGGGTACAGAAATCGAATGAGCCTCTAGCTACTTTAGCAGCATACAGGAGGGCAAAGTGCGACAATGAGACCGGGGAGGAAACATCTTCTTGGCTTCAGGTGGGTCAGGAAGTATGTCCTGATGCATGA 2388 41.12 MDTAKQQFLKEFGESYGYRDAPKNIDDIRATEFKRLDGNVYLDHAGATLYSELQMEAIFKDLHTTVYGNPHSQSSSSSATSDIIEDARHQVLKLCNASPKEYKCIFTSGATAALKLVGEAFPWSNQSTFMYTIENHNSVLGIREYALNKGAAALAIDFKEAAESSSIKVSHHPVQKRSEARVLDKQPTGEIYNLFAFPSECNFSGVRFNLDLIDIVKEDSEKLLEGSQHCRGNWMVLLDAAKGCSTDPPNLLTYKADFVVMSFYKLFGYPTGLGALIVRNEAAKLLKKSYFSGGTVAAAIADIDYVKRREGIEESFEDGTLSFLSIASIRHGFNILNTLTPLSISRHTSSLATYTRNMLLELRHTNGQEVCKIYGMEYLKAAYSGLGPVVSFNLKRTDGSWVGPRELEKLASLSGIQLRTGCFCNPGACSKYLGLSHADLLSNIEAGHVCWDDLDILHGKPTGAVRISFGYMSTFEDAWRFMNFIVNSFVSLPTSTLRSRSIQFATEGGKTTTEHYLASIVVYPIKSCAGFKVDSWPLSSTGLLYDREWLLKSMNGEILTQKKVPEMNLIGTKIDLETGMLHVESPRCKEKLLIELKSNLFAAVEEINVHAQRYEVMGYDNEIDTWFSNAVGRPCYLLRSSSRSCTCLNRSQNPSICRDIKTRLNFVNEAQLLLISEESVSDLNHRLNSIVKEEGSVLPIKVDAMRFRPNVVISGGGPYAEDGWGGLKIGKNHFMSLGGCNRCQMINLNYEAGGVQKSNEPLATLAAYRRAKCDNETGEETSSWLQVGQEVCPDA 795
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00600 795 Gene3D - 55 338 IPR015421 -
Dapi23g00600 795 Pfam MOSC N-terminal beta barrel domain 516 634 IPR005303 -
Dapi23g00600 795 Pfam MOSC domain 662 791 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Dapi23g00600 795 SUPERFAMILY PLP-dependent transferases 29 486 IPR015424 -
Dapi23g00600 795 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 3 490 - -
Dapi23g00600 795 Hamap Molybdenum cofactor sulfurase [MOCOS]. 15 793 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Dapi23g00600 795 ProSiteProfiles MOSC domain profile. 640 794 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Dapi23g00600 795 Pfam Aminotransferase class-V 233 478 IPR000192 -
Dapi23g00600 795 Pfam Aminotransferase class-V 40 152 IPR000192 -
Dapi23g00600 795 SUPERFAMILY MOSC N-terminal domain-like 517 646 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00600 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251802 Dapi7g00580 Dapi23g00600
387195 Dapi23g00600 Dapi7g00580
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:13302311 Dapi27g00128 Dapi-Chr27:2390619 dispersed
Dapi Dapi-Chr7:12429082 Dapi23g00600 Dapi-Chr23:13302311 transposed
Dapi Dapi-Chr23:13302311 Dapi7g00579 Dapi-Chr7:12424070 wgd