AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00650 ATGGCGATTTTCGCGGGAAAATTCATGTATTCCAAAGCATTTGAGGTTCAGTCACGAGTGTTCTTGAAGCCCTGGGGGGAGACGAAGATTAATAAGATTATAGTTCGATGCTGTTCGAATATTGGGGAAAGCTCTGCGGATTTTCCAGTTAGGTATACTCCTAAGCGACCTTCTAATTTGAATAAACCTAACGATCCTGCTCCGATTAAAAAGAACTCCGACGAATTCGAATTGCGTCGATACGGAAATGATGATTCGAGGAATGCTGAGTTTTCAAATGATTGGGAGAGGTCCAGAAAATCACCGGATTTCAAGTCAGGTAATTTAAGATCTAAAGGAAAGAAAGTTGGTAATTCAGCTGTGAGATTGGAGGTGTTGGAGCATAATTATAAATGGAGATCTGTGGAATCAAATTCTGTGGAAGGATTTAATGAATTTGATGTAATGGAAGGTGATGAGGATGCTTTAGATGAACTTGATTCTCATAATGGAGAATATGAAATCAAGCATCTAGCAATTGAGCCTGGTAAAAGTAAAGAAGAAGCTGAGACGGCCGCAGTTAGATTGCTTGCTGCAAGAGCATATACATCACTCGAGCTGAAGAAGAAACTGTCAGGAAAGAAATTCTCCCCTGAAGTTATCAATGCTGTGATCTCTGACTTCCAGAACAGGGGGTTGATAAATGATTCCTTGTATGCTGAAGCGTTTTCTCGATCGAGATGGTCTTCATCAAGTTGGGGACCACGTAGAATCAAGCAAGCTCTGGCCAAAAAGGGTGTTAATGATGTTGATGCACAGAAAGCAATAAAATTGGTTTTAGAAGATGGCCAGTCCATCGATGATGATCAAGTTTCAAGATTTGGACTTTCAAAGCCCTCCATGGACCATCTATTTTCACAAGCTTCAAAGCAATGGATCCGTGCTAAAGATCTCCCAAGTGAAAAACAAAAATCAAGAATCATCAGTTGGCTTCAATACCGTGGCTTTAATTGGGGAATTATTAACTTCATCTTGAAAAAGTTACAATCTGAGCATCCTCCTTAA 1044 40.04 MAIFAGKFMYSKAFEVQSRVFLKPWGETKINKIIVRCCSNIGESSADFPVRYTPKRPSNLNKPNDPAPIKKNSDEFELRRYGNDDSRNAEFSNDWERSRKSPDFKSGNLRSKGKKVGNSAVRLEVLEHNYKWRSVESNSVEGFNEFDVMEGDEDALDELDSHNGEYEIKHLAIEPGKSKEEAETAAVRLLAARAYTSLELKKKLSGKKFSPEVINAVISDFQNRGLINDSLYAEAFSRSRWSSSSWGPRRIKQALAKKGVNDVDAQKAIKLVLEDGQSIDDDQVSRFGLSKPSMDHLFSQASKQWIRAKDLPSEKQKSRIISWLQYRGFNWGIINFILKKLQSEHPP 347
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00650 347 Pfam RecX, first three-helix domain 184 219 IPR053926 -
Dapi23g00650 347 Gene3D - 228 271 IPR036388 -
Dapi23g00650 347 MobiDBLite consensus disorder prediction 49 113 - -
Dapi23g00650 347 Gene3D - 181 226 IPR036388 -
Dapi23g00650 347 Pfam RecX, third three-helix domain 295 338 IPR053925 -
Dapi23g00650 347 Hamap Regulatory protein RecX [recX]. 151 345 IPR003783 GO:0006282(InterPro)
Dapi23g00650 347 MobiDBLite consensus disorder prediction 68 110 - -
Dapi23g00650 347 Pfam RecX, second three-helix domain 228 268 IPR053924 -
Dapi23g00650 347 Gene3D - 292 346 IPR036388 -
Dapi23g00650 347 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 13 346 IPR003783 GO:0006282(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00650 K03565 regulatory protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
251828 Dapi7g00638 Dapi23g00650
387221 Dapi23g00650 Dapi7g00638
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:14948801 Dapi7g00638 Dapi-Chr7:14072372 wgd