AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00655 ATGGGAAAGAGAAAGGAGCGTAGACTTTCCGCGAAATCCGGTGCTAATCGAAGAGTAAAACTCGATCTTCTAGTGGAACCCTCTGGAGATTTTGGTGATTCGTCTAACCAAGAAGAAGTTGGAGTTGGCGGCAATGGGAAAAGTCATGCTGGGTCACCCAATTCACCATCTTCTTCAGGTCAAAGACCAGAAAATCCTCTGTTGTTGCTTGGACAGTATAGCGATGAAGAAGTGGAGGAAGACTCGAGTAAAGAAATAAACCACGAAGGTAGAGAAAATTCCCCAACAGTGCTATATGAGCAGCAGGTAAAGGTAAACAATCATGATAATACAGGAGCAGATGCAGATGAAAACCTTTTTACTGAAAAAGTTGATCAAGAGAACAAGGAACCTTCTTCAATGGATGCCTTGCCAAATTTGGAGAAAATTAGTGTTATAGAGGATGATAAACTCGAGCATCTACACAAAGATACAGATACACTAGATCGGGCCTCTGTTTCTTTGACATCAGATATGCAGGCAACAGGGGATGTGGATTCGGGATGGAAAATGGTGTTGCATGAGGAAAGTAATTCATACTATTATTGGAACATTGTTACTGGTGAAACTTCTTGGGAAACCCCTGATGTTCTGACCCAAAGAAATGAATCAGCATATGATCCTAAACCTGTCCCAGAAATTGAAGAAAAACATGAAACTTTTGTTGATACACAAGCTAATAATGAATCCACAAATGGTGTGGTTCTTGAGGCCAAAGAAATCAATAATTCTAGGATTGAATTGAAAGTGCATAATGAAAACCATACAGATATCATGGCAAAGTATAAAGACCAGGGCTTTGCCACACAATCTTGTGATGCTTTGACCAATGCGGAAGCCCACCATAATGATTCTGTTATTCAAGATACGGGTGATCATGGTGGCGAATCTTCTGATTCTTTTCGACTTCTACAAATTTGTGAAAGTCTATCAGAAAGATTAAAATCTTTGGAAGGTTTTAGGTCTGAAGGGTTCAATGACCAAATATCAAAGTTGATGTTTGAACTTGATATAAGGGTTGCAGACATTAAGTCACTAGTACCATATGGATCATTATTGCTTCCTTTTTGGTTGCATTCTGAAAACCAGCTGAAGAATCTGGAATCTTCTATCAACAATGAAGTTCTAAAACATTCACAATTCACAGATATTGGTGAAATTAATGAACCAAAAACCAGATTTCAGGAAAACGATGGTGAATTCCATGAAAATGCGATTCCAGCAGATATTGACCCAAATGTGGGCCACCATGCGGTGGAAGATGAAGACATGGATGTGGAGATGGAAGTTGAAGATACTGCAATTCATTCTATAGATGAAGCGGGTGGCCAGAACGGCCCTCAGTTAGATCAATCTATTTCACCTGTCCAACATGAACACCTTGATTCTCGTGGATCTGAACAAGACTCTGGCGTTCCACTTCCTCCAGATGATGATTGGATTCCGCCGCCTCCACCGGATGAAGAACCGTTACCTCCTCTACCACCAGAGGAGCCACCTGAAGCCCCATTACCACCACAACCATCAGATATGCAGACAACACAACCTTATTCTTATGGAGAACAATATAGTTTTACATACCCGGGGTCCGGTTTTGATTACTATGGCCAAACAAACACAGAAATCTCGGGTAACGGTTATTATTTAGATGCTAATGGATCTCATTTAGCTGCTCCCCTCCCAACTGTTTATTATGCACCAGTACAGAACCCAGCGCCTGTAACATATTACACCCTACAAGATGGGGCAATATCAACCGTGCCAGTCATCAGTAGTGTAGAAACTTCCGGTTTGCAGAATTCAGTTTATGAAAACATCATCTCTGATCAAACCAAATCGTCTACAGCGGCTCCTTCTATTTTGGCCTCTTCACATGTACCAGAAAGTTCTAGTGTAACACGTGATGTTTCTGTGGTGTCAGCTCCTTCTGTTGCTCCGACAGAAACGGTTCCTAAGGTTCAACCTAAAGTTACACGTATCAAAAAAAGAACTGTTGCAACGGTTCCCTCTTTACGGTCCAACAAGAAAGTTTCTGGCTTGGTGGATAAGTGGAAGGCTGTTAAAGAGGAGCTGCATGAAGACGAGGAAGATGAACCTGAAAACACATTAGAGTTTTTAGAGAAGAAACGACAACGAGAGATTGAGCAATGGCATGCCCAACAGATTGCATCCGGAGAAGCCAAAGTCAATGCCAACTTTCAGCCGCTTGGTGGTGATTGGCGGGAGAGGGTTAGGCGAAAGAGAGCTAAAAAATCAACACGTGTTGAAGAAAATCTAGCAAATGCCACTGATGAAACAAAACAACAGCCCGACCTGGCTGAAGTTTCAAAACAACTCCCAACGGGATGGCAGGCATATTGGGATGAATCATCCAAGCAGGTTTATTATGCTAACTCGGCCACATCGGAGACAACATGGACTATACCGACAAAGTAA 2475 41.94 MGKRKERRLSAKSGANRRVKLDLLVEPSGDFGDSSNQEEVGVGGNGKSHAGSPNSPSSSGQRPENPLLLLGQYSDEEVEEDSSKEINHEGRENSPTVLYEQQVKVNNHDNTGADADENLFTEKVDQENKEPSSMDALPNLEKISVIEDDKLEHLHKDTDTLDRASVSLTSDMQATGDVDSGWKMVLHEESNSYYYWNIVTGETSWETPDVLTQRNESAYDPKPVPEIEEKHETFVDTQANNESTNGVVLEAKEINNSRIELKVHNENHTDIMAKYKDQGFATQSCDALTNAEAHHNDSVIQDTGDHGGESSDSFRLLQICESLSERLKSLEGFRSEGFNDQISKLMFELDIRVADIKSLVPYGSLLLPFWLHSENQLKNLESSINNEVLKHSQFTDIGEINEPKTRFQENDGEFHENAIPADIDPNVGHHAVEDEDMDVEMEVEDTAIHSIDEAGGQNGPQLDQSISPVQHEHLDSRGSEQDSGVPLPPDDDWIPPPPPDEEPLPPLPPEEPPEAPLPPQPSDMQTTQPYSYGEQYSFTYPGSGFDYYGQTNTEISGNGYYLDANGSHLAAPLPTVYYAPVQNPAPVTYYTLQDGAISTVPVISSVETSGLQNSVYENIISDQTKSSTAAPSILASSHVPESSSVTRDVSVVSAPSVAPTETVPKVQPKVTRIKKRTVATVPSLRSNKKVSGLVDKWKAVKEELHEDEEDEPENTLEFLEKKRQREIEQWHAQQIASGEAKVNANFQPLGGDWRERVRRKRAKKSTRVEENLANATDETKQQPDLAEVSKQLPTGWQAYWDESSKQVYYANSATSETTWTIPTK 824
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00655 824 SUPERFAMILY WW domain 791 823 IPR036020 GO:0005515(InterPro)
Dapi23g00655 824 ProSitePatterns WW-rsp5-WWP domain signature. 182 208 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 ProSiteProfiles WW-rsp5-WWP domain profile. 790 824 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 SMART ww-5 791 824 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 SMART ww-5 177 210 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 SUPERFAMILY WW domain 169 209 IPR036020 GO:0005515(InterPro)
Dapi23g00655 824 ProSitePatterns WW-rsp5-WWP domain signature. 796 822 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 Gene3D - 785 824 - -
Dapi23g00655 824 PANTHER OS06G0298400 PROTEIN 410 824 - -
Dapi23g00655 824 ProSiteProfiles WW-rsp5-WWP domain profile. 176 210 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 CDD WW 180 209 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 CDD WW 793 823 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 Gene3D - 176 221 - -
Dapi23g00655 824 MobiDBLite consensus disorder prediction 489 523 - -
Dapi23g00655 824 MobiDBLite consensus disorder prediction 1 96 - -
Dapi23g00655 824 MobiDBLite consensus disorder prediction 470 529 - -
Dapi23g00655 824 MobiDBLite consensus disorder prediction 757 786 - -
Dapi23g00655 824 MobiDBLite consensus disorder prediction 30 65 - -
Dapi23g00655 824 Pfam WW domain 180 208 IPR001202 GO:0005515(InterPro)
Dapi23g00655 824 Pfam WW domain 792 822 IPR001202 GO:0005515(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00655 K24774 formin-binding protein 4
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251831 Dapi7g00642 Dapi23g00655
387224 Dapi23g00655 Dapi7g00642
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:15260042 Dapi7g00642 Dapi-Chr7:14246752 wgd