AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00665 ATGAGCAGCGGCGGCGTAGACGGCGAGACTAGGGTTTCCATTCCTCACAATGCTCGGAAGGCAATTCAAGACCTCACCAAAACCCTAAGGTACAAGCACACCGACGAGTTCGTCTACACAACGCTCTATGACTCCGCTATGGATCCTATCGAAGCTAGCCGGAGATTGAAGATGATTCATGATATTAGAGAGATCGCCGGAAAGCACAGCGTGGAGGATGTCTACACAATGCTCAAAGAATGCAATCTGGATGCTAATGAAGCTGCTCAGAGGCTGTTGTATATCGATACTTTTCATGTGGTTAAAAAGAAACATGACCGGAGAAAAGCCATAAGCAGTGATGTTTCTCAAGAGAATAAACAGACACGGGGTAATCAATGGAGGGGAGATAAGAGCGGGCGTGGGACTTTCTACTTATCAAAAGTTTTTGAAGATGTTGGAGGTGGGAGGAATTTGAGTTCAGGGAAGGAATATGGTGTTGCTAATCGCCCGGAGAGGGTTTTGAGGCCAACCTTGCCAGGTCATACGGGAAAGGAAAACAACATAGTGCATGTGTCAAATTCTTGTGCCAATGGCAATGGTACACCGACTATTTCCAATGGGAGTTACAACCATAAGCCTGCATCTGAACTATCTGCAGATGTCACATCTTCTACTTCAGATCATGTTGTGGTTTCATCTCAGAACACCAAGCACACATGCGCTGTGGGGACAATAAAATTTATCACAGAAGCTGAAGATTCTGACCTAAAATCAACTGTAGCTGAAAAGAATCAGATCCCAGAGTCTTTGCAGCCTCTTTTGTTGTCAACCCAAACTAATTCACAGGTTGTCAGTCCTATTCAGGATAATCAGCAGCTTCCTCAATCAGTAAATGAGCCTCTAGAAGTGACTGATTTTGAGCATACAAATACGGTTTCTGAAGAGGAGTCTGAATTGACTACAGCTCCAAAACTTGATGTGTTGCTAGAGAAACCGACTTTATCTTCTCACCAAGCTGTTATTTTCCCTGATCATCTACAAGTCCCAGAAAATTATAAATGCCAGTTCATATTTGGAAGTTTGGATGCTACTGATGATGATTGCAAACCTGTTTCCGTGAATGAATCTACTCAGCAAAATGAAGTTGTAAAAGAACTTTCTTTGAGCAACGAAAATGCTTCCATAATAACCCAGGAAGGTGAAATTCAAGATCATGTTTTTGAAGATGTATTGCCTTCAGAAGATAACATCTCATCTGATTCTTCTGCTCTGAAACACGAGCAGACAAATGTGGAGATAATTCCTCCTCCCCCTTCAACAGGATTTCAGAATCTTCCAGTTATCCAAACTACCAGGGACTACTATGGTTACATGCCACCTCTGATGGGCCCACATTTTGTACAAATTGATATACCTGAGCTACAGAATGGGAACACTCAAGCTGGCCAACCTCCTGTAACACAACCAGCAGTGGCAGGCCAGAGTTCCATAGCTTTATCTCCACCCCTCTTTCCTTATTTCAGACCATATCCGAACTACATTCCTTATCATCCATATTTCCCACATATGTATTTGCCACAAGCTGCTCACTTGTTGAACCATGGCGTATTCCCTCAGCCACCACCACCTACCGCCAATGTCCACCATATGCAGGCGTCGGTAGCAGGGGTGAACGAGAACAAACAAGGAAGTAATGAAGATATTACATCTGAAGCTGAAGATAACAATACTCCTTCAACGGGTCAACAGGTTGAAGATCCACAAGCTCGGGTTAACCCACCTCCCCATGATTTACCTAATATATTTCCAAATTATTTCTACAGCTTCCCCCAGGGACAACACCTGGCCGCCTTTTCACCCTTGCAAGCGGCTGCTCTTTATCATTCTTCACAAGCCCTGACCGCTCAATCCACCATACAACCGCCACTCATGTATCAACCACATCCCACTGGTCCCACCGTTGAACCGATGGTGCTGCCATCTACCCCTTACCATCAAAATCAGCATGCACTGCCGGTTAACCGTAACGACACCGCGTTAGTGAACACAGGGACCGGTTGA 2043 44.64 MSSGGVDGETRVSIPHNARKAIQDLTKTLRYKHTDEFVYTTLYDSAMDPIEASRRLKMIHDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHVVKKKHDRRKAISSDVSQENKQTRGNQWRGDKSGRGTFYLSKVFEDVGGGRNLSSGKEYGVANRPERVLRPTLPGHTGKENNIVHVSNSCANGNGTPTISNGSYNHKPASELSADVTSSTSDHVVVSSQNTKHTCAVGTIKFITEAEDSDLKSTVAEKNQIPESLQPLLLSTQTNSQVVSPIQDNQQLPQSVNEPLEVTDFEHTNTVSEEESELTTAPKLDVLLEKPTLSSHQAVIFPDHLQVPENYKCQFIFGSLDATDDDCKPVSVNESTQQNEVVKELSLSNENASIITQEGEIQDHVFEDVLPSEDNISSDSSALKHEQTNVEIIPPPPSTGFQNLPVIQTTRDYYGYMPPLMGPHFVQIDIPELQNGNTQAGQPPVTQPAVAGQSSIALSPPLFPYFRPYPNYIPYHPYFPHMYLPQAAHLLNHGVFPQPPPPTANVHHMQASVAGVNENKQGSNEDITSEAEDNNTPSTGQQVEDPQARVNPPPHDLPNIFPNYFYSFPQGQHLAAFSPLQAAALYHSSQALTAQSTIQPPLMYQPHPTGPTVEPMVLPSTPYHQNQHALPVNRNDTALVNTGTG 680
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00665 680 MobiDBLite consensus disorder prediction 552 588 - -
Dapi23g00665 680 PANTHER FLOCCULATION PROTEIN (DUF1296) 551 665 IPR044277 GO:0051082(PANTHER)
Dapi23g00665 680 MobiDBLite consensus disorder prediction 115 129 - -
Dapi23g00665 680 SUPERFAMILY UBA-like 57 110 IPR009060 GO:0005515(InterPro)
Dapi23g00665 680 MobiDBLite consensus disorder prediction 552 581 - -
Dapi23g00665 680 MobiDBLite consensus disorder prediction 111 132 - -
Dapi23g00665 680 Pfam GBF-interacting protein 1 N-terminal 56 109 IPR009719 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00665 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251839 Dapi7g00651 Dapi23g00665
387232 Dapi23g00665 Dapi7g00651
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:15425723 Dapi7g00651 Dapi-Chr7:14402703 wgd