Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dapi23g00673	ATGAAGCAACGGTTAATGGTTAGGGTGTTTTCCCAAACCCTAGCCCTGATTCCTTTCCACCGTCGTTCTCGGACTGCCTTCTCCACTGCTTCTTCGAGTTTTGCTATCAAGAATGTTACTAAATCCAATTTTGATTTGTCTCTGGCTGACCTTCGGCGGCATGTCAGAGACTCTGATTTTGTGTCAATTGACTTGGAAATGACGGGAGTCACGAGCGCTCCGTGGAGGGAGTCTTTTGAGTTTGATAGATTTGATATTCGGTACCTTAAGGTGAAGGATTCTGCTGAGAAGTTTGCTGTTGTTCAGTTTGGAGTTTGCCCTTTTAGATGGGATTCAACCAAGCAGTCCTTTATCGCCCATCCGCACAACTTTTACATATTTCCAAGGCAAGAAATTGGAGCTGATGACTCGTCTTATGAGTTCCTGTGCCAGACTTCCTCAATTGATTTCTTGGCAAAGTACCAGTTTGATTTTAATGTTTGCGTAAAAGAAGGAATATCTTATTTATCCAGAGCGCAAGAAGATGATCTTAGGTTGCAGTTACATTTAGCACAAGAAGATGAGCCATCGGAGTCACCATGTAAAACTAAAGAAATTAAAGATGTTCCACTGGTCAGGATGGCAGATATTCTTTTTGTGGAGAGAATGAAGAAAAAAATTAGTGAATGGCATGATGACTTGTTACAGATTAGAAATGGAGGGTCTCACAGGACCTCGGAAGATTCTAATGACTCAATTGATCCGTTTCAGACTATTTTCTTTAGGACACATCCAGCCATCAAATTGAATGGATTCACCTCCCGCCAACTAAGGTTAATTAAGTCGGTTGTAGAAAAGAGCTTCAAAGATTTAGCGTTCATCCGTGCAAATGATGGGTCATGTTTTCAACAAATTATTGTTTACACAGACTCCAGAAGGGATCTAGAGTTGCTTATGAAAGAGGTTAAAGAAAGCCATTTGAAGGAAGCAGAATTGAAGATTGAAGCTGCCATTGGCTTCCGCTATGTGATCGACCTCCTTTCGTCTGAACAAAAGTTGATTGTTGGACATAACTGTTTTCTTGATATTGCACATATATGTAGAAAATTCGTGGGCCCCCTTCCTTCGAGTCTTGAGGATTATGTACCATTAGTTCAAAAAAACTTCCCGTTCATAATTGACACGAAAATTCTTCTGAATGCAAACAACATATTACAATTAAAAATGAAGAAAAGTAGCACGTCACTCTCCAAAGCTTTTGCAATCATGTGTCCTCATATTGCTTCTGGTGTCTCGAGTTTTGGTTCTGCTCATAATAATTCTGTTGCAGTTGAGGTTCAAGTCGATGATATGAGGTCATCAAATTGGAACTCTGGAGCTAAACATGAAGCTGGTTATGATGCTTTCATGACAGGCTGTATTTTTGCCCAATCATGCAACCATCTTGGTATTGATTTCACACCTCACTCAATGTTAATGAAACAAGATAAGCTTCAAAGCTACATCAACCTTCTGTACCTCAGTTGGTCTAGCGGCGACATAGTTGACCTTAAAACTGGTCAAACCAGAACAGAGTCTTCAGCATTCAACAGTTTCAAGATCCAACAACCGAAGATTCTGTTTCCAAATATCGTCATAATTTGGGGTTTCTCGTCTAAGCTCAAAGCGAGGGAGATAAAAGAATCTTTGACCAAAGTCTTTGGGTTGACTTCTGTTACATCCATCTTGCATTTGGATAAAACCGCAGTGTTTGTTCAGTTTAGCAAACCAGAATTAGTTTATGATTTTCTGAAACTCAAATCGGACATAGAGAAGAAGAAGAACGACGCCATATACGTTCTGCATCCGTTTTCAGACCTTCTAGAAGGTGGGCTTACTGGTGCTGCTTGTTATGAGGTCTATAAAGAGATTTGTGGGTCACCCATTTCAAAAGTCTTGTTTGCTGATCAAGCTGAAGCTGTCTGTGTTAATTCGGACTACAAACTGTTGGGAACTATGGCCCACAAAACTGATTCTTTTGCCGATTCAGAATCCGCAATCAATACCAGGACGGCTGAAACCACCGGCGAAATACTAGGTTTGGTATCCTGTTGA	2073	40.52	MKQRLMVRVFSQTLALIPFHRRSRTAFSTASSSFAIKNVTKSNFDLSLADLRRHVRDSDFVSIDLEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEKFAVVQFGVCPFRWDSTKQSFIAHPHNFYIFPRQEIGADDSSYEFLCQTSSIDFLAKYQFDFNVCVKEGISYLSRAQEDDLRLQLHLAQEDEPSESPCKTKEIKDVPLVRMADILFVERMKKKISEWHDDLLQIRNGGSHRTSEDSNDSIDPFQTIFFRTHPAIKLNGFTSRQLRLIKSVVEKSFKDLAFIRANDGSCFQQIIVYTDSRRDLELLMKEVKESHLKEAELKIEAAIGFRYVIDLLSSEQKLIVGHNCFLDIAHICRKFVGPLPSSLEDYVPLVQKNFPFIIDTKILLNANNILQLKMKKSSTSLSKAFAIMCPHIASGVSSFGSAHNNSVAVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCIFAQSCNHLGIDFTPHSMLMKQDKLQSYINLLYLSWSSGDIVDLKTGQTRTESSAFNSFKIQQPKILFPNIVIIWGFSSKLKAREIKESLTKVFGLTSVTSILHLDKTAVFVQFSKPELVYDFLKLKSDIEKKKNDAIYVLHPFSDLLEGGLTGAACYEVYKEICGSPISKVLFADQAEAVCVNSDYKLLGTMAHKTDSFADSESAINTRTAETTGEILGLVSC	690

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dapi23g00673	690	PANTHER	POLY A -SPECIFIC RIBONUCLEASE-TARGET OF EGR1, MEMBER 1	36	647	IPR051181	GO:0000175(PANTHER)\|GO:0003723(PANTHER)\|GO:0005737(PANTHER)
	Dapi23g00673	690	SUPERFAMILY	Ribonuclease H-like	36	481	IPR012337	-
	Dapi23g00673	690	Pfam	CAF1 family ribonuclease	39	468	IPR006941	-
	Dapi23g00673	690	Gene3D	-	236	514	IPR036397	GO:0003676(InterPro)
	Dapi23g00673	690	Gene3D	-	38	202	IPR036397	GO:0003676(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dapi23g00673	K01148	poly(A)-specific ribonuclease [EC:3.1.13.4]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Dapi	Dapi-Chr23:15575942	Dapi6g02021	Dapi-Chr6:58253772	dispersed
	Dapi	Dapi-Chr18:37107460	Dapi23g00673	Dapi-Chr23:15575942	transposed
	Dapi	Dapi-Chr23:15575942	Dapi7g00659	Dapi-Chr7:14554549	wgd