AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi24g00157 | ATGTCCAACGAAAAGGAAAGAGAAACTCATGTTTACTTGGCGAAGCTTGCGGAACAAGCCGAACGTTACGAAGAGATGGTTGAAAGTATGAAGAGTGTTGCGAAACTAAACGTTGAACTTACTGTTGAAGAGCGCAACCTGCTTTCAGTTGGATACAAGAATGTGATTGGTGCAAGGAGGGCGTCTTGGCGTATCATGTCATCGATTGAACAAAAAGAGGAATCAAAGGGAAATGAAAGCAATGTTACCCTGATTAAAGGTTACTGCCGAAAGGTTGAAGACGAGCTTGCCAAAATTTGCAGTGACATTCTTGAGATTATAGATAAGCATCTCGTGCCCTCTTCTGGCTCAGGAGAAGCCACTGTTTTCTACTACAAGATGAAAGGTGACTACTACCGGTACCTTGCTGAATTCAAGACAGACCAGGAAAGGAAGGATGCTGCTGAACATTCATTGAAAGGCTATGAGGCTGCAGCTGCTGCTGCAAACACGGAACTCCCTTCAACCCACCCAATTCGTCTTGGCCTTGCTCTCAATTTCTCAGTGTTCTACTATGAAATTATGAATTCTCCTGAGAGGGCCTGCCATTTGGCCAAACAAGCTTTTGATGAGGCAATTGCTGATCTGGACTCCTTAAGTGAAGAATCTTACAAGGACAGCACCTTGATCATGCAGCTCTTGAGAGATAACCTCACTCTCTGGACCTCTGATTTGCCCGAGGATGGAGGTGATGAAAACCAGCCTAAGGGTGAAGAATCCAAGCCAGCTGAACCAGAGGAGAAGAAGTAG | 789 | 45.12 | MSNEKERETHVYLAKLAEQAERYEEMVESMKSVAKLNVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVTLIKGYCRKVEDELAKICSDILEIIDKHLVPSSGSGEATVFYYKMKGDYYRYLAEFKTDQERKDAAEHSLKGYEAAAAAANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIADLDSLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENQPKGEESKPAEPEEKK | 262 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi24g00157 | 262 | SMART | 1433-4 | 7 | 248 | IPR023410 | - | |
| Dapi24g00157 | 262 | PANTHER | 14-3-3 PROTEIN | 6 | 240 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Dapi24g00157 | 262 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
| Dapi24g00157 | 262 | MobiDBLite | consensus disorder prediction | 242 | 262 | - | - | |
| Dapi24g00157 | 262 | PIRSF | 14-3-3 | 1 | 248 | IPR000308 | - | |
| Dapi24g00157 | 262 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Dapi24g00157 | 262 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - | |
| Dapi24g00157 | 262 | Gene3D | - | 1 | 247 | IPR036815 | - | |
| Dapi24g00157 | 262 | Pfam | 14-3-3 protein | 13 | 235 | IPR023410 | - | |
| Dapi24g00157 | 262 | MobiDBLite | consensus disorder prediction | 235 | 262 | - | - | |
| Dapi24g00157 | 262 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Dapi24g00157 | 262 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Dapi24g00157 | 262 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
| Dapi24g00157 | 262 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Dapi24g00157 | 262 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
| Dapi24g00157 | 262 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - | |
| Dapi24g00157 | 262 | Coils | Coil | 145 | 165 | - | - | |
| Dapi24g00157 | 262 | FunFam | 14-3-3 protein epsilon | 1 | 248 | - | - | |
| Dapi24g00157 | 262 | Coils | Coil | 13 | 33 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi24g00157 | K06630 | 14-3-3 protein epsilon |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr21:131320946 | Dapi24g00157 | Dapi-Chr24:2173892 | dispersed | |
| Dapi | Dapi-Chr24:2173892 | Dapi32g02058 | Dapi-Chr32:76494352 | dispersed | |
| Dapi | Dapi-Chr18:131389658 | Dapi24g00157 | Dapi-Chr24:2173892 | wgd | |
| Dapi | Dapi-Chr18:133660018 | Dapi24g00157 | Dapi-Chr24:2173892 | wgd | |
| Dapi | Dapi-Chr2:141430879 | Dapi24g00157 | Dapi-Chr24:2173892 | wgd | |
| Dapi | Dapi-Chr24:2173892 | Dapi5g02083 | Dapi-Chr5:119103075 | wgd | |
| Dapi | Dapi-Chr24:2173892 | Dapi8g00293 | Dapi-Chr8:5265486 | wgd | |
| Dapi | Dapi-Chr24:2173892 | Dapi8g00201 | Dapi-Chr8:3531343 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Dapi26g00352 | . | 6 | 257 | 14-3-3 family | AT2G42590 | 76.68 | 2.04e-142 | 398.0 | |
| Dapi27g01746 | . | 125 | 151 | 14-3-3 family | AT1G34760 | 66.667 | 7.76e-07 | 43.5 | |
| Dapi14g01456 | . | 2 | 257 | 14-3-3 family | AT1G78300 | 85.603 | 9.70e-163 | 449.0 | |
| Dapi14g01455 | DST | 140 | 188 | 14-3-3 family | AT1G35160 | 75.51 | 3.18e-16 | 73.9 | |
| Dapi19g01442 | . | 2 | 258 | 14-3-3 family | AT1G78300 | 86.434 | 9.76e-158 | 450.0 | |
| Dapi19g01186 | . | 24 | 257 | 14-3-3 family | AT3G02520 | 88.462 | 2.31e-152 | 422.0 | |
| Dapi30g01671 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 83.806 | 6.02e-157 | 434.0 | |
| Dapi18g02915 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 84.17 | 1.06e-162 | 450.0 | |
| Dapi1g01435 | . | 3 | 258 | 14-3-3 family | AT1G78300 | 87.109 | 2.32e-165 | 456.0 | |
| Dapi12g01372 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 77.186 | 7.87e-152 | 422.0 | |
| Dapi13g01120 | . | 156 | 256 | 14-3-3 family | AT1G78300 | 88.119 | 9.98e-59 | 179.0 | |
| Dapi10g00382 | . | 6 | 257 | 14-3-3 family | AT2G42590 | 77.075 | 6.15e-144 | 402.0 | |
| Dapi32g02058 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 1.13e-150 | 419.0 | |
| Dapi5g02083 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 82.625 | 6.65e-160 | 444.0 | |
| Dapi2g03741 | . | 6 | 262 | 14-3-3 family | AT1G26480 | 85.057 | 4.72e-163 | 451.0 | |
| Dapi27g01049 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 85.603 | 1.68e-163 | 451.0 | |
| Dapi27g01013 | . | 4 | 242 | 14-3-3 family | AT5G10450 | 87.029 | 2.68e-156 | 432.0 | |
| Dapi8g00201 | . | 6 | 267 | 14-3-3 family | AT1G26480 | 82.824 | 1.03e-162 | 450.0 | |
| Dapi16g01826 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 1.13e-150 | 419.0 | |
| Dapi31g00119 | . | 158 | 189 | 14-3-3 family | AT2G42590 | 81.25 | 3.43e-12 | 60.5 | |
| Dapi14g00652 | . | 3 | 259 | 14-3-3 family | AT3G02520 | 87.938 | 1.05e-165 | 457.0 | |
| Dapi11g00974 | . | 4 | 247 | 14-3-3 family | AT5G10450 | 86.475 | 4.49e-159 | 439.0 | |
| Dapi11g01021 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 85.603 | 1.96e-163 | 451.0 | |
| Dapi8g00293 | . | 6 | 267 | 14-3-3 family | AT1G26480 | 82.824 | 1.03e-162 | 450.0 | |
| Dapi18g03036 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 84.17 | 4.44e-162 | 449.0 | |
| Dapi1g01014 | . | 1 | 245 | 14-3-3 family | AT2G42590 | 81.224 | 3.89e-151 | 420.0 | |
| Dapi1g01010 | . | 1 | 245 | 14-3-3 family | AT2G42590 | 81.224 | 2.21e-151 | 421.0 | |
| Dapi24g00765 | . | 2 | 259 | 14-3-3 family | AT1G78300 | 83.784 | 2.69e-163 | 451.0 | |
| Dapi24g00157 | . | 6 | 267 | 14-3-3 family | AT1G26480 | 82.824 | 1.03e-162 | 450.0 | |
| Dapi8g00958 | . | 2 | 259 | 14-3-3 family | AT1G78300 | 83.784 | 1.42e-163 | 451.0 | |
| Dapi3g01016 | . | 3 | 238 | 14-3-3 family | AT3G02520 | 91.102 | 1.01e-156 | 447.0 | |
| Dapi3g01285 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 3.11e-163 | 451.0 | |
| Dapi30g00674 | . | 3 | 259 | 14-3-3 family | AT3G02520 | 87.938 | 1.05e-165 | 457.0 | |
| Dapi21g02637 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 83.012 | 2.45e-161 | 447.0 | |
| Dapi30g01501 | . | 2 | 257 | 14-3-3 family | AT1G78300 | 85.992 | 3.35e-163 | 451.0 | |
| Dapi30g01500 | DST | 140 | 188 | 14-3-3 family | AT1G35160 | 73.469 | 1.07e-15 | 72.4 | |
| Dapi17g01932 | . | 3 | 258 | 14-3-3 family | AT1G78300 | 87.109 | 3.96e-165 | 456.0 | |
| Dapi17g01071 | . | 1 | 245 | 14-3-3 family | AT2G42590 | 80.816 | 2.01e-150 | 418.0 | |
| Dapi17g01066 | . | 1 | 245 | 14-3-3 family | AT2G42590 | 81.633 | 6.92e-152 | 422.0 | |
| Dapi29g01093 | . | 156 | 256 | 14-3-3 family | AT1G78300 | 88.119 | 9.98e-59 | 179.0 | |
| Dapi29g00624 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 88.492 | 1.25e-158 | 457.0 | |
| Dapi15g00627 | . | 157 | 256 | 14-3-3 family | AT1G78300 | 91.0 | 1.99e-61 | 186.0 | |
| Dapi13g00627 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 88.492 | 3.80e-157 | 456.0 |