AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi24g00165 | ATGGCTCTTTTGGAATCAAACAAGAATAGAGGGGAGGTGAGAATTCATGAAAGTTTGGATGAACTCAGCACAGATTTGGCTGATTACATAGCAGAATTGTCCGAGGCATCCGTTAAAGAACGTGGCTTTTTCGCCATTGCATTATCTGGTGGTTCCATCATTCCCTTGATGAGGAATCTGTGTGGAGCTCCTTATAACAAGACTGTTGATTGGTCCAAATGGTATATATTTTGGGCGGATGAACGTGTGGTTGCGAAGAATCATGTTGACAGCAACTATAAACTTGCTAAAGATCATCTTTTGTCTAAGTTGCCTATTGTTCCAAGTCATGTACATTCCATCAATGACTCTCTCACCGCAGAAGAAGCTGCTAACGAATACGAGTTTGTGATAAGACAGCTGGTGAGGACCCGTGTGGTCAACGTGTCTGATGTCAGCGACTGCCCGAAGTTTGACTTGATTCTTCTAGGCATGGGACCGGATGGCCACGTGGCGTCTTTAATGCCAGACCATCCGGTCCTTGAAGAAAAGAATGAATGGGTGACATTCATCACCACTTCCCCTAAACCACCGCCCGAAAGGATCACCTTCACCCTTCCCGTTATCAACTCGGCTGCCAATGTGGCAGTGGTGGTGACAGGGAGTGGGAAAGCAGAAGCTGCACGGCTGGCTATAGACGATGTGGGACCCGAGTGCCCGGTGTTGCCAGCTAGGATGATTGAACCAATTGTAGGGAAATTGGTGTGGTTTTTGGATAATCAGGCTGCTTCAAGGCTTTAA | 780 | 46.92 | MALLESNKNRGEVRIHESLDELSTDLADYIAELSEASVKERGFFAIALSGGSIIPLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLMPDHPVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGSGKAEAARLAIDDVGPECPVLPARMIEPIVGKLVWFLDNQAASRL | 259 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi24g00165 | 259 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 5 | 259 | IPR039104 | - | |
| Dapi24g00165 | 259 | CDD | 6PGL | 20 | 251 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Dapi24g00165 | 259 | Gene3D | - | 8 | 259 | - | - | |
| Dapi24g00165 | 259 | FunFam | Probable 6-phosphogluconolactonase | 8 | 259 | - | - | |
| Dapi24g00165 | 259 | NCBIfam | 6-phosphogluconolactonase | 15 | 258 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Dapi24g00165 | 259 | Coils | Coil | 19 | 39 | - | - | |
| Dapi24g00165 | 259 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 19 | 249 | IPR006148 | GO:0005975(InterPro) | |
| Dapi24g00165 | 259 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 13 | 259 | IPR037171 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi24g00165 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 78499 | Dapi21g00164 | Dapi24g00165 | |
| 79709 | Dapi24g00165 | Dapi5g00120 | |
| 253675 | Dapi24g00165 | Dapi8g00302 | |
| 382954 | Dapi18g02903 | Dapi24g00165 | |
| 383031 | Dapi18g03025 | Dapi24g00165 | |
| 387758 | Dapi24g00165 | Dapi2g03728 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1919821 | Dapi | Dapi24g00165 | Dapi-Chr24:2299955 | Dapi2g02656 | Dapi-Chr2:103943723 | |
| 2014883 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi24g00165 | Dapi-Chr24:2299955 | |
| 2014925 | Dapi | Dapi18g03025 | Dapi-Chr18:133521660 | Dapi24g00165 | Dapi-Chr24:2299955 | |
| 2022026 | Dapi | Dapi2g03728 | Dapi-Chr2:141306067 | Dapi24g00165 | Dapi-Chr24:2299955 | |
| 2027301 | Dapi | Dapi21g00164 | Dapi-Chr21:3441262 | Dapi24g00165 | Dapi-Chr24:2299955 | |
| 2037964 | Dapi | Dapi24g00165 | Dapi-Chr24:2299955 | Dapi5g00120 | Dapi-Chr5:2722713 | |
| 2039036 | Dapi | Dapi24g00165 | Dapi-Chr24:2299955 | Dapi8g00302 | Dapi-Chr8:5413081 | |
| 2039558 | Dapi | Dapi24g00165 | Dapi-Chr24:2299955 | Dapi8g00213 | Dapi-Chr8:3671496 |