AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi2g03739 ATGAAGACAAATTCGAACTCGTTTGTGGTGATTCCATTAATACTATCTGAGGTAACGAATAGACAAACCCTAGAAACAACCAAGCTGGGATATTTGAGGATCTGCAACTGCAATAACCAGTCCTCATTAATTAATGGTGGTTCATTCATCACCTCTTCATCTTCAACAAATCTTCAATCCATTTCTCACTTACCCCATATAGGGTTTCTGGAATATCAATTGAAGATGTATGTGGTGGATAGCAGAGGAGGAGCGATCGCATGTATGCTGCTTGCGCTACTCTTCTTAGGAACATGGCCCGCCATTTTAACGTTGTTGGAACGACGTGGCAGGCTTCCTCAACACACTTATCTTGATTACTCAATAACCAATCTTCTTGCTGCTGTCATTATTGCTTTCACATTTGGGGAATTTGGCCATACCAATGATGATAAGCCCAATTTTCTAGTCCAGCTTTCTCAGAATAATTGGCCAAGCGTTCTGTTTGCAATGGCGGGCGGGGTTGTTTTAAGTTTGGGAAATCTGTCAACGCAATATGCATGGGCATTTGTTGGTTTATCGGTCACGGAGGTGCTCACCTCAAGTATTACTGTTGTTATTGGTACAACTTTAAACTACTTTTTGGACGACAAGATCAACAGGGCCGAGATACTGTTTCCAGGTGTTGCTTGTTTCTTGATTGCTGTTTGTTTAGGTTCTTTAGTGCATGCCTCCAACGCCAAAGATAATCAAGCAAAGCTTGAAAGACAAGGCGCGGGTGAAAAAGGAGTAATTAGTAATGGATCAAACTCGAATCCAAAAAACGATTTGGAGCATGGAAGTCGTAAGGTCGAGAAAGCAAAAGCAGGGACTGCAAATTTTCTTATTGAGCTCGAAGGCCGTAGAGCAATCAAGGTGTTCGGGAAAAGCACATTGATTGGTTTGGCCATATGTTTCTTTGCGGGATCTTGTTTCTCTCTTTTCTCGCCGGCTTTTAATCTTGCAACCAATGACCAATGGAATACATTGGATGATGGTGTCCCTCATTTAAGTGTGTACACAGCTTTTTTCTACTTCTCGTGCTCGTGTTTTGTGATTGCCATAATCTTGAACATTACATTCCTTTACCGCCCCGCCTTCAACCTGCCTCGGTCTTCGATCAGGGCGTATTTGAACGACTGGGACGGTCGAGGCTGGGCGTTTCTGGCTGGCTTTTTGTGTGGGTTTGGGAATGGTCTCCAGTTTATGGGAGGCCAAGCTGCTGGTTATGCTGCAGCTGATGCAGTTCAGGCACTTCCACTTGTAAGTACCTTTTGGGGTGTGCTCTTTTTTGGGGAATACCGCAAATCGTCGAGAAGAACATACGTGCTTCTCGCAGGCATGTTATCCATGTTTATTGTGGCTGTTGGAGTTCTGATGGCGTCGTCTGGACATCGAAAACATTGA 1425 43.93 MKTNSNSFVVIPLILSEVTNRQTLETTKLGYLRICNCNNQSSLINGGSFITSSSSTNLQSISHLPHIGFLEYQLKMYVVDSRGGAIACMLLALLFLGTWPAILTLLERRGRLPQHTYLDYSITNLLAAVIIAFTFGEFGHTNDDKPNFLVQLSQNNWPSVLFAMAGGVVLSLGNLSTQYAWAFVGLSVTEVLTSSITVVIGTTLNYFLDDKINRAEILFPGVACFLIAVCLGSLVHASNAKDNQAKLERQGAGEKGVISNGSNSNPKNDLEHGSRKVEKAKAGTANFLIELEGRRAIKVFGKSTLIGLAICFFAGSCFSLFSPAFNLATNDQWNTLDDGVPHLSVYTAFFYFSCSCFVIAIILNITFLYRPAFNLPRSSIRAYLNDWDGRGWAFLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVLFFGEYRKSSRRTYVLLAGMLSMFIVAVGVLMASSGHRKH 474
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi2g03739 474 MobiDBLite consensus disorder prediction 252 277 - -
Dapi2g03739 474 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 76 473 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
Dapi2g03739 474 Pfam Ureide permease 116 468 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi2g03739 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
257391 Dapi18g02913 Dapi2g03739
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr18:131368420 Dapi2g03739 Dapi-Chr2:141409359 dispersed
Dapi Dapi-Chr18:131371565 Dapi2g03739 Dapi-Chr2:141409359 dispersed
Dapi Dapi-Chr18:133611929 Dapi2g03739 Dapi-Chr2:141409359 dispersed
Dapi Dapi-Chr18:133633129 Dapi2g03739 Dapi-Chr2:141409359 dispersed
Dapi Dapi-Chr2:141406184 Dapi2g03739 Dapi-Chr2:141409359 tandem