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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi30g00590 ATGGATATGCAAAGCGACTTCGATCGCCTTCTGTTTTTCGAGCATGCTCGCCGGACTGCGGAGGCGACCTACACCCATAACCCTCTCGATTCCGAGAACTTAACAAGATGGGGAGGTGCCTTGCTTGAATTATCGACCTTCCAGAGTGTCCAGGAATCAAAATCGATGATTAAAGATGCTATATCGAAATTGGATGAAGCATTGTCGATTGATCCGAAGAAACATGATGCTTTGTGGTGTATGGGCAATGCACAAACTTCTTATGCTTTTTTGACTCCTGATAAAGATGAAGCGAAGGGTTATTTTGAATCAGCTTCTGCTTTCTTTGAGCAGGCTGTTAATGAGGATCCGGAGAATGAACTTTACCGCAAATCATTTGAAATGGCTGCAAAGGCTCCTGAATTACACTCAGAGCTCCATAAACCGGGTTTTAGTCAACAAGCTATGGGACCAGCGGCTGGGGGAGGCCCATCAACTTCTTCAAGTGTTAAGGGTCCAAAGGCGCAAAAGAGCAGCGATCTGAAGTATGATATATTTGGATGGGTTATTCTTGCTGTTACTATTGTGGCTTGGGTTGGATTCTCCAAAGCAAATGCACCTTCACCACCTCCACGATAA 618 44.98 MDMQSDFDRLLFFEHARRTAEATYTHNPLDSENLTRWGGALLELSTFQSVQESKSMIKDAISKLDEALSIDPKKHDALWCMGNAQTSYAFLTPDKDEAKGYFESASAFFEQAVNEDPENELYRKSFEMAAKAPELHSELHKPGFSQQAMGPAAGGGPSTSSSVKGPKAQKSSDLKYDIFGWVILAVTIVAWVGFSKANAPSPPPR 205
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi30g00590 205 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 204 IPR010547 GO:0005742(InterPro)|GO:0045040(InterPro)
Dapi30g00590 205 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515(InterPro)
Dapi30g00590 205 Gene3D Tetratricopeptide repeat domain 1 149 IPR011990 GO:0005515(InterPro)
Dapi30g00590 205 MobiDBLite consensus disorder prediction 142 167 - -
Dapi30g00590 205 MobiDBLite consensus disorder prediction 152 167 - -
Dapi30g00590 205 Pfam Plant specific mitochondrial import receptor subunit TOM20 7 196 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi30g00590 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
255720 Dapi14g00567 Dapi30g00590
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr30:10037200 Dapi5g00033 Dapi-Chr5:845940 dispersed
Dapi Dapi-Chr10:20167642 Dapi30g00590 Dapi-Chr30:10037200 wgd
Dapi Dapi-Chr10:7247129 Dapi30g00590 Dapi-Chr30:10037200 wgd
Dapi Dapi-Chr14:10184175 Dapi30g00590 Dapi-Chr30:10037200 wgd
Dapi Dapi-Chr26:20613088 Dapi30g00590 Dapi-Chr30:10037200 wgd
Dapi Dapi-Chr26:6683168 Dapi30g00590 Dapi-Chr30:10037200 wgd