Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi31g02029 | ATGAATTCGATTAAGCTATGGCCTCCTAGCCACAGCACGAGGCAAATACTCATGGACCGGATTGTAAAAAACCTCACAACCCCATCCATTTTGACAAGAAAATACGGGCTTTTAAGCAAAGAAGAAGCAGAGGAAGATGCTAAACACATCGAATCTGCAGCATTTGCAGCTGCGACACAACAATTTGAAAAGGAGCCCGAAAGTGATGGAGGATCCGCGGTCCAAATTTATGCTAAAGAATCTAGTAAACTAATGGTAGAGTTTGTCAAAACTGGTCCCAAACATAAAGAAGACCGAGAGACCATACCAGACTTGACCACATTAGACCATGAACACGTTTTTGATATTTCTGGAGGGCGTCAGGCCTTCATTGATGCAGAAGAGGCTAAAGAGCTGCTAAAACCATTAAAGGAGCCTGGAAACAAGTTCACAAAAATCCGTTTTAGTAATAGGAGTTTCGGGTTATCTGCAGCTCATGTGGCTGCGTCGATATTGTCATCTATCAAAGATCAGTTAACTGAAGTTGACTTGTCGGATATTGTTTCTAGGAGGCCCGAGCCTGAAGCTGTTGAGGTTATGAAAATGTTTTCATCAGCACTTGAGGGTTGTCAGTTGAATTATCTGAATTTATCTAATAATGCTTTGGGTGAAAAGGGGGTAAGGGCCTTTGGGGGTCTTTTGAAGTCCCAAGGTAATCTTGTTGAGTTGTTTTTTATGAATGCTGGGATCTCACAAGAAGCTGCAAAGGCGGTTTCCGAGTTGATTCCTTCGACCAGTAAACTTAAGATTCTTCATTTTCATCATAACATGACGGGAGATGAAGGTGCAGTTGCTATTTCTCAACTTATTAAAGGATCTCCCAATCTAGAGGATTTCAGGTGTTCCTCCTCAAGGGTTGGGTCAGTAGGGGGTGTTGCACTAGCTGAAGCACTTAAGACATGCACCCTTTTGAAGAAACTCGACTTACGCGACAACATGTTTGGACCAAAACCGGGGGTTGCATTGAGTCAAGCCCCTTATGCAAACCTTACCGAAATCTACCTCAGTTACTTGAATTTGGAAAATGAAGGGACTATAGCCCTCGCAAATGCTCTAAAACAACCCGATTCCGCCCTTGAAATAATGGAAATGGCCGGAAACAACATCACTACAGAAGCGGCAGCTAATGCTTTGGCTGCTTGCATGATCTCAAACAAACACTCTTTGACCCGAATAAACTTATCTGAAAATGAAATCAAAGACGCGGGAGCTATGGTGATCGCAAAGGCACTTGAAGATGCGTTTGGACGATTATGTGTGGTTGATTTTAGCACCAATGGGATTGAGACAGGTGGCGCCGTGGCATTGGCTAAAGCGGTTGTGGCTAAACCGGGGTTTAGACTGTTAAATATTAATGGTAACTTCTTATCTCACGATGGTGTTGAGGTTGTTAGAGATATTTTTAAGGATTTCCCTCGTATGCTGGGACCGCTCGATCAGAATGACACTCGTCGTCACGAATTTGATGAGCTCGAGTCGAAGCTCAAGGACCTTGAAATGAAGCAGAAACAATAA | 1554 | 43.24 | MNSIKLWPPSHSTRQILMDRIVKNLTTPSILTRKYGLLSKEEAEEDAKHIESAAFAAATQQFEKEPESDGGSAVQIYAKESSKLMVEFVKTGPKHKEDRETIPDLTTLDHEHVFDISGGRQAFIDAEEAKELLKPLKEPGNKFTKIRFSNRSFGLSAAHVAASILSSIKDQLTEVDLSDIVSRRPEPEAVEVMKMFSSALEGCQLNYLNLSNNALGEKGVRAFGGLLKSQGNLVELFFMNAGISQEAAKAVSELIPSTSKLKILHFHHNMTGDEGAVAISQLIKGSPNLEDFRCSSSRVGSVGGVALAEALKTCTLLKKLDLRDNMFGPKPGVALSQAPYANLTEIYLSYLNLENEGTIALANALKQPDSALEIMEMAGNNITTEAAANALAACMISNKHSLTRINLSENEIKDAGAMVIAKALEDAFGRLCVVDFSTNGIETGGAVALAKAVVAKPGFRLLNINGNFLSHDGVEVVRDIFKDFPRMLGPLDQNDTRRHEFDELESKLKDLEMKQKQ | 517 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi31g02029 | 517 | Gene3D | Ribonuclease Inhibitor | 101 | 516 | IPR032675 | - | |
| Dapi31g02029 | 517 | SUPERFAMILY | RNI-like | 110 | 500 | - | - | |
| Dapi31g02029 | 517 | Pfam | WPP domain | 3 | 98 | IPR025265 | - | |
| Dapi31g02029 | 517 | Pfam | Leucine Rich repeat | 399 | 421 | IPR001611 | GO:0005515(InterPro) | |
| Dapi31g02029 | 517 | Pfam | Leucine Rich repeat | 205 | 223 | IPR001611 | GO:0005515(InterPro) | |
| Dapi31g02029 | 517 | Gene3D | WPP domain | 3 | 100 | IPR038214 | - | |
| Dapi31g02029 | 517 | PANTHER | RAN GTPASE-ACTIVATING PROTEIN 1 | 3 | 516 | IPR045203 | GO:0005096(InterPro) | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 258 | 285 | - | - | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 456 | 483 | - | - | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 340 | 367 | - | - | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 399 | 426 | - | - | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 202 | 229 | - | - | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 286 | 313 | - | - | |
| Dapi31g02029 | 517 | SMART | LRR-RI-2 | 369 | 397 | - | - | |
| Dapi31g02029 | 517 | Coils | Coil | 494 | 514 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi31g02029 | K14319 | Ran GTPase-activating protein 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr31:99965822 | Dapi7g02518 | Dapi-Chr7:110786890 | wgd |