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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi31g02030 ATGGCGTCCGGCGGGTGGAGTTTTCTAAAAGTTCTTGAAAATCCGTCACCGGAGTGCAAGAATCTTGATGAAAACGACGACGTTTATGTTCATCCGATGGTTAAACGGTCGGCATCGGTATTGAGTACCAAGAGCTTAGAGATGTGTACGGAGAGTTTAGGGAGTGAGACGGGGAGTGATGTTAGTGAAAGTGGGGATGAGTTTTGTGCAATTTCAATATTGGAAAGGGACAGATTGAGGGCGAGTCAATGGTCAAAGTGCCGGAATTTTGACCGGAAAGTTCGCCGGAGTGAGTTTCCACCGCCGTTGACATCCATCAGCAGCTCCGATAGGGCGGTGAAGGTGAGGCACCACCGGGAGGGTGGGCGGTTGGTTATAGAGGCGGTTAGTGTTTCTAACTACGGTACAAGTTTTCAAGCGGAACGTACAAATGGGAGGCTTAAGCTTTCTTTGTTGAAGGAGTGTTGTGCAAATTATGAAAGTGAAGGGGTTGAAGTGGAAGATTATGAAAGTGAAGGGGTTGAAATGGAAGATTATGAACGTGAAGGGGTTGAAGTGGAAGATTATGAAAGTGAAGGGATTGAAGTGGAAGATTATGAAGAAGGTGATGAGGTGGAATCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGGTGGATGAGGCAGCGTCGGAGGAGAGCGGTGGTTTGCGGTGGGATATAGACGGAAACCGGTGGATGATGACCGGAAAAGGGGAGTTGAATAGGCTAACACGGTGCAACGAGCGCGGAAATGGCAACAAAGTGTTTGCAAGTTGGCGTTCTACTTCGCTGGCAATTTCTTGA 837 48.86 MASGGWSFLKVLENPSPECKNLDENDDVYVHPMVKRSASVLSTKSLEMCTESLGSETGSDVSESGDEFCAISILERDRLRASQWSKCRNFDRKVRRSEFPPPLTSISSSDRAVKVRHHREGGRLVIEAVSVSNYGTSFQAERTNGRLKLSLLKECCANYESEGVEVEDYESEGVEMEDYEREGVEVEDYESEGIEVEDYEEGDEVESEEEEEEEEEEEEEEKVDEAASEESGGLRWDIDGNRWMMTGKGELNRLTRCNERGNGNKVFASWRSTSLAIS 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi31g02030 278 MobiDBLite consensus disorder prediction 164 240 - -
Dapi31g02030 278 MobiDBLite consensus disorder prediction 164 226 - -
Dapi31g02030 278 Coils Coil 199 230 - -
Dapi31g02030 278 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 3 270 IPR021410 -
Dapi31g02030 278 Pfam Fantastic Four meristem regulator 98 151 IPR046431 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi31g02030 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
385629 Dapi20g01880 Dapi31g02030
390166 Dapi31g02030 Dapi4g01931
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr30:76774744 Dapi31g02030 Dapi-Chr31:100138979 dispersed
Dapi Dapi-Chr31:100138979 Dapi3g01957 Dapi-Chr3:67163217 dispersed
Dapi Dapi-Chr20:110382193 Dapi31g02030 Dapi-Chr31:100138979 wgd
Dapi Dapi-Chr31:100138979 Dapi4g01931 Dapi-Chr4:118365680 wgd
Dapi Dapi-Chr31:100138979 Dapi7g02519 Dapi-Chr7:110794431 wgd