AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi31g02038 ATGCCTTCCGTTGCTCACCTTCATCACTCTCCTCTTGCTGGAAACAACCGTCATTTAATTCCGGCTACTCGTATCCCCGACCTCAAATTACCAACCCTAACCACCAACACGCTTGTCAAATTTACCGTTTTGCCCCTCCGATCACAGCCAATCCGCCCTAATTTACTATCCAATCCACAACCTATTTCCTCCGCCGCCACCGGTGGCGGCGGCGATGGTGCCGGCCATGGAGGCGGCGACGGAGGAGGTAGCGGCGGTGATAGTAACGGTAACGGCAACAGCAACAGAAACGAAAACGGAAACGGAGACAGTTTCGGCATATTTGGGGCGTTTGTTAGCGGATGGAGATCTAGGGTTTCAGCGGATCCCCAATTTCCATTTAAAGTATTAATGGAAGAAGTTGTTGGTGTGAGTGCAACCGTTTTTGGTGACATGGCAACTCGTCCTAATTTCGGTTTAAACGAACTAGATTTCGTGTTCTCCACGTTAGTAGTAGGATCAATATTGAATTTCACTCTAATGTATCTATTAGCCCCCACCATGTCATCCACATCAACATCCCTCCCTTTAATATTCGCCAATTCGCCACCGAGCCACATGTTTGAGCCCGGTGCGTACACCCTGGTGAACCGGCTAGGGACGTTTGTGTACAAAGGGGTTGTGTTTGCAGCGGTGGGGTTTGCGGCTGGGTTGGTTGGGACCGCGGTGTCGAATGGGTTGATTAAGATAAGGAAGAAGATGGACCCTGGGTTTGAGTCGCCCAACATGGCTCCACCGACGGTTTTGAATGCGGTTACATGGGCGGTTCATATGGGGTTAAGTGCTAATTTGAGGTACCAAAGTTTGAACGGGATCGAGTTTGTGTTGGCAAAGGGGTTGTCGCCGTTGTTGTTTAAGAGCTCGGTGTTCGGGTTGAGGTTGGCGAATAATGTTGTTGGTGGGATGACTTTTGTGATGTTGGCGAGGGTGACTGGATCGCAAAGCGTTGCTGGCGGTGGACCGAAAAAGGCTGCCGGTGAAGCGGTTTTGGATGAGGAGAAGAAGTTACTTAGCAATGAAATTGCTTCGAAGTGA 1074 50.09 MPSVAHLHHSPLAGNNRHLIPATRIPDLKLPTLTTNTLVKFTVLPLRSQPIRPNLLSNPQPISSAATGGGGDGAGHGGGDGGGSGGDSNGNGNSNRNENGNGDSFGIFGAFVSGWRSRVSADPQFPFKVLMEEVVGVSATVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMSSTSTSLPLIFANSPPSHMFEPGAYTLVNRLGTFVYKGVVFAAVGFAAGLVGTAVSNGLIKIRKKMDPGFESPNMAPPTVLNAVTWAVHMGLSANLRYQSLNGIEFVLAKGLSPLLFKSSVFGLRLANNVVGGMTFVMLARVTGSQSVAGGGPKKAAGEAVLDEEKKLLSNEIASK 357
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi31g02038 357 MobiDBLite consensus disorder prediction 50 100 - -
Dapi31g02038 357 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 45 329 - -
Dapi31g02038 357 Pfam Protein RETICULATA-related 118 285 IPR021825 -
Dapi31g02038 357 MobiDBLite consensus disorder prediction 51 65 - -
Dapi31g02038 357 MobiDBLite consensus disorder prediction 86 100 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi31g02038 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
249062 Dapi31g02038 Dapi4g01820
385556 Dapi20g01757 Dapi31g02038
390170 Dapi31g02038 Dapi4g01820
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1936367 Dapi Dapi31g02038 Dapi-Chr31:100905461 Dapi32g01376 Dapi-Chr32:28946258
2024851 Dapi Dapi20g01757 Dapi-Chr20:106176541 Dapi31g02038 Dapi-Chr31:100905461
2049495 Dapi Dapi31g02038 Dapi-Chr31:100905461 Dapi4g01820 Dapi-Chr4:114852668