AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi31g02039 ATGGCATATCGTAGACGGCAGGGGCTTTCTAGGTCTTCGACGTTCAAGGAAGGGACTCGCTATCCGTCGGACCAAGACGACGCCACCACGTCTTCCGCCGCTATCCCGCACACGTCTTCCGATTCTCGTCTCGACTCGTTTCGCTCTGGCGCGTTTCACTCGTCGTTTAAAAACCGATCCAAGGGTTCTGCTACCTCTGATTATGCTCCGGTGAGGAGTTCAAATGAACGAGGGGGATTTTGGGGCGTTTTGGCAAGGAAAGCTAAAGGTATTCTCGAAGATGAAGTTCCTCAACAATCAAATGCTCGTAGCAGTGTAAAGCCAGAAACAGATAGTTACTCAACAATCAATCAGAAGCGCACTGGCATTCAGGTTCAGAATCAAAATGAATCCTATGGGGATATGAAGAAAATGGATAGTCCCGCGTTAAGGATCACACCTTCGCTTAGTCAAATTAGTTACACCATTGGCAACTCTTTGGAGAACAAACTAGTAATAAAGAGTGAAGAAAAAAATCAGGATCCAAAACTGCAATCTGCTCAACCACAGAACCAAGAAACTCTACTTCAGGCTTCTCGCGACGTGGCGATTGCAACAGCTGCTAAGGTGAAAAAACTTATGCGGGAGCTGAGAACTGTGAAGGCAGAATTAGTATTTACAAAAAAAAGATGTTCTCAGCTAGAAGAAGAAAATAAATTGCTTTCAGGTTCTCATGAAAAAGGAGATCACCCTACAGATGATGACATGATACGGGATCAGCTAGAGACGCTATTGGCGGAAAAGGGGCGTTTGGCACATGAGAATTCAGTGTATGCACTTGAGAACAGACACTTGAAGGAAATAGTTGATTTCCACCAACTAACCATGCAAGATTTGATGTATTATGATGAGGGTGTCATAGAGGTCACACTACCCACAACACCAGAAGCCTACCAAATTCTAGCAGGTCATGATGAGGGTGTTATAGAGGGCTCATCCTCTAGTTCTAGCAGGTCAGTATAG 1002 44.91 MAYRRRQGLSRSSTFKEGTRYPSDQDDATTSSAAIPHTSSDSRLDSFRSGAFHSSFKNRSKGSATSDYAPVRSSNERGGFWGVLARKAKGILEDEVPQQSNARSSVKPETDSYSTINQKRTGIQVQNQNESYGDMKKMDSPALRITPSLSQISYTIGNSLENKLVIKSEEKNQDPKLQSAQPQNQETLLQASRDVAIATAAKVKKLMRELRTVKAELVFTKKRCSQLEEENKLLSGSHEKGDHPTDDDMIRDQLETLLAEKGRLAHENSVYALENRHLKEIVDFHQLTMQDLMYYDEGVIEVTLPTTPEAYQILAGHDEGVIEGSSSSSSRSV 333
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi31g02039 333 PANTHER UNCHARACTERIZED 1 172 - -
Dapi31g02039 333 MobiDBLite consensus disorder prediction 1 47 - -
Dapi31g02039 333 MobiDBLite consensus disorder prediction 53 72 - -
Dapi31g02039 333 Coils Coil 203 230 - -
Dapi31g02039 333 MobiDBLite consensus disorder prediction 7 47 - -
Dapi31g02039 333 MobiDBLite consensus disorder prediction 94 124 - -
Dapi31g02039 333 MobiDBLite consensus disorder prediction 97 124 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi31g02039 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
80498 Dapi27g00134 Dapi31g02039
249063 Dapi31g02039 Dapi4g01822
385559 Dapi20g01760 Dapi31g02039
390171 Dapi31g02039 Dapi4g01822
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1926046 Dapi Dapi27g00556 Dapi-Chr27:11526997 Dapi31g02039 Dapi-Chr31:100926583
1936368 Dapi Dapi31g02039 Dapi-Chr31:100926583 Dapi7g01588 Dapi-Chr7:75433908
1986840 Dapi Dapi11g00133 Dapi-Chr11:2273136 Dapi31g02039 Dapi-Chr31:100926583
2024852 Dapi Dapi20g01760 Dapi-Chr20:106200182 Dapi31g02039 Dapi-Chr31:100926583
2045283 Dapi Dapi27g00134 Dapi-Chr27:2487877 Dapi31g02039 Dapi-Chr31:100926583
2049496 Dapi Dapi31g02039 Dapi-Chr31:100926583 Dapi4g01822 Dapi-Chr4:114886559