AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi31g02059 ATGAAATACGTTTTGGTGACCGGAGGTGTCGTCAGCAGCCTCGGCAAGGGCGTCACCGCCAGTAGCATTGGCGTCGTTCTCAACGCCTCCGGCCTCCGCATCACCTCAATCAAAATCGGTTTTCTGTTCTCGAGAAGGAACGTAAAGGAGATTATCTTGGAAAAACTGTTCAGGCAAGTAGTTCCACATATAACGGATGCTATTAAGGATTGGATCGAGTCGGTGTCTGCTATTCCTGTGGATGGCAAAGTTGGCCCAGCAGATGTGTGTGTGATAGAGTTAGGAGGGACAGTTGGTGACATTGAATCTATGCCTTTCATAGAGGCTTTGCGACAGTTATTTTTCTCAAAAGGACCAGATAATTTCTGCCTTATTCATGTTAGTCTTGTACCTGTGCTTGGTGTTGTTGGGGAACAGAAAACAAAACCTACACAACATAGTGTTCGGGAACTGCGAACATTAGGGCTGACCCCTCACTTTTTAGCATGTCGGTCTGCTCAGGTTGCTAACATTCTCAATATTCATGATTCCCTCTTGTACTTCAGAACCAAAATGCTCATGAGGCAATCCTGA 573 45.9 MKYVLVTGGVVSSLGKGVTASSIGVVLNASGLRITSIKIGFLFSRRNVKEIILEKLFRQVVPHITDAIKDWIESVSAIPVDGKVGPADVCVIELGGTVGDIESMPFIEALRQLFFSKGPDNFCLIHVSLVPVLGVVGEQKTKPTQHSVRELRTLGLTPHFLACRSAQVANILNIHDSLLYFRTKMLMRQS 190
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi31g02059 190 Gene3D - 1 175 IPR027417 -
Dapi31g02059 190 PANTHER CTP SYNTHASE 1 39 IPR004468 GO:0003883(InterPro)|GO:0003883(PANTHER)|GO:0006221(InterPro)|GO:0006241(PANTHER)|GO:0019856(PANTHER)|GO:0042802(PANTHER)
Dapi31g02059 190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 169 IPR027417 -
Dapi31g02059 190 Pfam CTP synthase N-terminus 2 39 IPR017456 GO:0003883(InterPro)|GO:0006221(InterPro)
Dapi31g02059 190 Pfam CTP synthase N-terminus 59 167 IPR017456 GO:0003883(InterPro)|GO:0006221(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi31g02059 K01937 CTP synthase [EC:6.3.4.2]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
249067 Dapi31g02059 Dapi4g01851
390175 Dapi31g02059 Dapi4g01851
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1898214 Dapi Dapi15g00910 Dapi-Chr15:41471690 Dapi31g02059 Dapi-Chr31:101672748
1903788 Dapi Dapi17g03218 Dapi-Chr17:150059077 Dapi31g02059 Dapi-Chr31:101672748
1936384 Dapi Dapi31g02059 Dapi-Chr31:101672748 Dapi6g02719 Dapi-Chr6:108800931
2049504 Dapi Dapi31g02059 Dapi-Chr31:101672748 Dapi4g01851 Dapi-Chr4:115892930