AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi31g02101 ATGGGATTCAATTCAGTTTTTAGGGTTTTACAAGAGCTCTTTCCACAGGTTGATTCTCGTTTCTTGAAAGCCGTATCTTTAGAACACCCTAAGGATGTTGATGCGGCTGCGGAAGCGGTTGTTGAGATGATGTCTGAAAAACCGCTTACGGTTGGTTCGACTAGTCATAGCCAGAGTTTGCTCGGAGTCTTTGATGATGGTGAAAAATCCGGTAAAATCGAGTCAACTGTGGATCGTGTAGTTGTTAATCCATGTATTGCTGAACAATCAAGTGAAGATCATGCTTCAAGTGTTAATGGATGTTTACTTGGTGCAACGAAAGCTTTAGATGCTGGAAATAGTGAACCTAAAATTAACTGTGATGATGCACATGCACCTCTACTTTTGGAGACATTTGAAGAGGCCAATAATATTAATCCTGATAATGAAACTGTCTCTCTTGATAACCATGATCAAGAAAATGTGAATATTGGAGGTGAAAATGTTGATAACGAAACGTCAATTGGTTCTGAAAGCAACCGATTAGTAGACATTTCTGAAACAAATTTAGCAGACAATTTTGTTAATTCAGAGGATGAGTCGGTTATGAGTTCCGTGCTTACCAGATCAGAGCAGATTTGCAGCACCGGATATCTTGATGAAGTTATTGATGATGCTAAAAATAACAAGAAAGTGCTTGCATTGGCTATGAACTCGGTTGTTGAATTTATGAAAGTAGTGGAGTCTAAAGAACAGGCTGCTAAACAAGCAAACGAGGATGTTACACTGGGTTGTTCTGATATTCTTGCCAAGGTGGACGAGGTTAAATACGCACTTCTAAGGGCAAAAGAGGCGAATGATATGCACGCTGGAGAAGTAAACGCAGAGAAAGCGATTTTAGCTACTGAATTGAGAGAGCTTCAGCTTCGCTTGTTTACTTTGTCGGATGAGAGAAACAAAGCGCTTGGAATTCTTGACGAGATGCGTAGAGCGTTAGAGATTAGAATGGCCGCTGCTTTAGAAGAACTCGCAGCAGCAGAGGATGAAAAGTTAGAACGAGAACGGTCTGCTAGAGAAGCACTTTTGTACCAAGAAAGCGAAATGGAAAAAGTGGTTGAAGAGTCTAAGAAACTAAAGTTAGAAGCAGAGGAAAATTCTAAGTTGCAAGAATTCCTCATAGATCGTGGTCATGCGATTGATATCTTACAAGGAGAGATTGCGGTCAAGTGTCAGGATGTGTTACTGCTAAAAGAGAAGTTTGACAAACGAATTCCGCTATCAGAATTACTCTTTTCTAGCCAAACTTCATCAATTTTAGCATCTTCAAGTTCATCTTTTAAAGGCAACACAACACCTTTCGAACCCGAGATAGAGACATGTGAGACCCCAAAAAGGAGTTCAAAACATTGTGATTCTTATGGGATTTTTTACAAGAGTTCAAGGTCGGATGCATCACTCGAGTCTCCTATTATAGGAAATTCTATTAATGGTGAAGAGAAAAAGGTTGATGAACTTATAGGGATTTTAGATGATGATGGATGGGAGCTATATGAGAATGGTGACTTCTTGGTTAGATGA 1557 39.63 MGFNSVFRVLQELFPQVDSRFLKAVSLEHPKDVDAAAEAVVEMMSEKPLTVGSTSHSQSLLGVFDDGEKSGKIESTVDRVVVNPCIAEQSSEDHASSVNGCLLGATKALDAGNSEPKINCDDAHAPLLLETFEEANNINPDNETVSLDNHDQENVNIGGENVDNETSIGSESNRLVDISETNLADNFVNSEDESVMSSVLTRSEQICSTGYLDEVIDDAKNNKKVLALAMNSVVEFMKVVESKEQAAKQANEDVTLGCSDILAKVDEVKYALLRAKEANDMHAGEVNAEKAILATELRELQLRLFTLSDERNKALGILDEMRRALEIRMAAALEELAAAEDEKLERERSAREALLYQESEMEKVVEESKKLKLEAEENSKLQEFLIDRGHAIDILQGEIAVKCQDVLLLKEKFDKRIPLSELLFSSQTSSILASSSSSFKGNTTPFEPEIETCETPKRSSKHCDSYGIFYKSSRSDASLESPIIGNSINGEEKKVDELIGILDDDGWELYENGDFLVR 518
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi31g02101 518 ProSiteProfiles CUE domain profile. 2 46 IPR003892 GO:0043130(InterPro)
Dapi31g02101 518 Coils Coil 322 350 - -
Dapi31g02101 518 CDD CUE 7 39 - -
Dapi31g02101 518 PANTHER OS10G0315400 PROTEIN 1 151 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi31g02101 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
249075 Dapi31g02101 Dapi4g01907
385608 Dapi20g01856 Dapi31g02101
390187 Dapi31g02101 Dapi4g01907
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr31:103524203 Dapi7g02535 Dapi-Chr7:111017076 dispersed
Dapi Dapi-Chr20:109511827 Dapi31g02101 Dapi-Chr31:103524203 wgd
Dapi Dapi-Chr31:103524203 Dapi4g01907 Dapi-Chr4:117700378 wgd