Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01686 | ATGGCGGAGGAGTTAGTGTTGGATACAGCGATCAGAGATTGGGTGCTAATTCCTTTATCAGTAGTGATGGTTCTCATCGGAATACTTCGCTACTTCGTCTCCAAGCTCATGCGTACTTCTCAATTACCGGATTCCAAAATCATCAAAGAAGGGCAGGTTATAATTAGGGCTAGAAATCTAAGGGCAGCTGCTAATTTCATACCTCCCAAAGCCTTTCGTGCGAGGAAATTATATTATACGAATGAGGAAAACGGTTTACTTCATGTTCCCAAGGGCCAGGCTCAGAATCCACAGGCACAAATGTTCTCTGATCCAAACATGGCTATGGATATGATGAAGAAGAATCTTTCTATGATCATACCACAGACCCTCACTTTTGCATGGGTTAACTTCTTCTTTTCCGGGTTTGTAGCAGCAAAGATACCTTTTCCACTGACTCAGAGGTTTAGATCCATGTTACAGAACGGGATTGATTTGAGTACTGTTGATGTCAGCTACGTTAGCAGTCGTTCTTGGTACTTTCTTAATCTGTTTGGATTGAGAGGCCTGTTTAGTCTCATTCTGGGAGAGGAAAATGCCACAGACGATACACAGCGCATGATGCAAATGAGTGGATTTGGCTTTGATCCATCAAAGAGTCTAGGTGCAGAAAAAGACGGTTTAGATATAGTTCAGCATGATTGGGTCCTACCAAAATTTGAGCAGCGTGCTGAAGCCGTGCTCAGAAAACGCCTTAGCAGCTAA | 744 | 43.15 | MAEELVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRTSQLPDSKIIKEGQVIIRARNLRAAANFIPPKAFRARKLYYTNEENGLLHVPKGQAQNPQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDGLDIVQHDWVLPKFEQRAEAVLRKRLSS | 247 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01686 | 247 | SMART | DUF106-2 | 4 | 192 | IPR002809 | GO:0016020(InterPro) | |
| Dapi4g01686 | 247 | Pfam | Integral membrane protein EMC3-TMCO1-like | 4 | 192 | IPR002809 | GO:0016020(InterPro) | |
| Dapi4g01686 | 247 | PANTHER | UNCHARACTERIZED | 1 | 244 | IPR008568 | GO:0016020(InterPro)|GO:0034975(PANTHER)|GO:0072546(PANTHER) | |
| Dapi4g01686 | 247 | PIRSF | TMP-111 | 1 | 244 | IPR008568 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01686 | K23564 | ER membrane protein complex subunit 3 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 249086 | Dapi31g02163 | Dapi4g01686 | |
| 260201 | Dapi20g01620 | Dapi4g01686 | |
| 264804 | Dapi4g01686 | Dapi20g01620 | |
| 385495 | Dapi20g01620 | Dapi4g01686 | |
| 390201 | Dapi31g02163 | Dapi4g01686 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr20:95899171 | Dapi4g01686 | Dapi-Chr4:104309622 | wgd | |
| Dapi | Dapi-Chr31:105861989 | Dapi4g01686 | Dapi-Chr4:104309622 | wgd |