AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi4g01786 ATGGAAGCACTTGATCCTAATGACGGTGGCGTGAGGGGGGAGGTTGACACGTCAGCACCATTTGAGTCGGTGAAGGAGGCCGTGTCCCGGTTCGGTGGAGTCGGGTTCTGGAAACCCAATAATAAGCAGCACACTCATGCTTCTGAGAATGACATTGAAGAAGAATTTGATGCTGCTAAAGCGGAAGAGCAAGCTGAGCGGTTAGCAAACGATCTCATGGTTAAAGAAAGGGAAACACTTGCTGTCTTGAAAGAACTCGAAGCAACGAAAACAACCATCGAAGAGTTAAAAGTCAAACTACAGAAAGAATCCGCTACAGTCAACCCAAAAGTCAACGATCCGATACCAAGAGAGGATAATGACAAAATTGCCCTTGACCCGAACCCTCAATCAGCTGGGGACACCTTGATGTGTCCTTCTTCAGCTCCAGGTTACATATTAATGGAATTGAAGCAGGCTAAACTGAACTTAACAAGAACAACAAGCGATCTTGCTGACATCAGATCGACTGTCGAAACGTATAGCCGAATGATCGAGAAAGAAAGATTGGAACTTGAGAAAACCCGTCAAAGATTATCGTCAAATTGTTCAAAAGTTTCATCTTTTGACGAAGGCGTTGACATTCCGAGGGAGATCCAGAGGTTGATTTTTGAAACAGAGGAGTTCAAAAGGGTTGGAGAGGTAGCACAATCAGAAGTTTTAAACGCGATGAATCAAATCAAGCAGACGAAAGTAAATATAAAAACAGCCGAAACCCGTCTAATTGCTGCTAGAAAGTTGAAGGAAGCCGCTAAAGCTAGTGAAGCGCTTGCACTATCTGAAATAAAGTCAATATCAAAAAGTCAAACTTTAGCCGAACACGAAGGGGTTACGCTATCGTTTGAAGAATACTCTTGTTTAAAACAAAAAGCCCGAGAGGCGGATGAAGCTTTAGTTAAAAAAGTCAACGAATCGATGGCCAAAGTCAACGAATCCGAGTTGTCAAAGTCAGAGATGTTGACTAGGGTAGAGGAAGCAGCAGAAGAAGTGAAGAACAGTAAGAAGGTTTTAGAAGAAGCTTTGAGTAAGGTTGAAACTGCTAATAAGGAGAAACTAAAAGCCGAAGAAGCTTTAAGGAAATGGCGGTCGGATCATGGTCAAAGAAGAAAATCAACTGTTCAAAACTCGACCAAGTTCAAGAACTCTACTTGCCGGACCAACACCACTCGTTTGTTGGACGTAAACGGGGCCCATTTGGGAAGTAATACACCTGGGCCCATTTTGGGGCCCACGATGTCGATCGGGCAGATTTTGAGCCGGAAGTTGCTTTTGACCGAAGAGTATTCCGGCAAAACCGAGACAAAAAGGAAGGTTTCTTTGGCGCAAATGTTGAGTAAGGCTACTACTAATGATGCCGGTGGTGGTGGGAAACGACGGTCGGGAAAGAGAAAGAAGTTCGGGTTCGGTAGGATTTCGTTTCTAGCCGCGAAGCCGAGCAAGAAGAAGAAGAAACATAGTGTAAGTTCAAGGCTTTCATGTGCCACTGATTAG 1530 44.18 MEALDPNDGGVRGEVDTSAPFESVKEAVSRFGGVGFWKPNNKQHTHASENDIEEEFDAAKAEEQAERLANDLMVKERETLAVLKELEATKTTIEELKVKLQKESATVNPKVNDPIPREDNDKIALDPNPQSAGDTLMCPSSAPGYILMELKQAKLNLTRTTSDLADIRSTVETYSRMIEKERLELEKTRQRLSSNCSKVSSFDEGVDIPREIQRLIFETEEFKRVGEVAQSEVLNAMNQIKQTKVNIKTAETRLIAARKLKEAAKASEALALSEIKSISKSQTLAEHEGVTLSFEEYSCLKQKAREADEALVKKVNESMAKVNESELSKSEMLTRVEEAAEEVKNSKKVLEEALSKVETANKEKLKAEEALRKWRSDHGQRRKSTVQNSTKFKNSTCRTNTTRLLDVNGAHLGSNTPGPILGPTMSIGQILSRKLLLTEEYSGKTETKRKVSLAQMLSKATTNDAGGGGKRRSGKRKKFGFGRISFLAAKPSKKKKKHSVSSRLSCATD 509
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi4g01786 509 MobiDBLite consensus disorder prediction 461 509 - -
Dapi4g01786 509 Coils Coil 83 106 - -
Dapi4g01786 509 Coils Coil 233 253 - -
Dapi4g01786 509 Coils Coil 58 78 - -
Dapi4g01786 509 MobiDBLite consensus disorder prediction 1 20 - -
Dapi4g01786 509 Coils Coil 171 191 - -
Dapi4g01786 509 Coils Coil 333 377 - -
Dapi4g01786 509 MobiDBLite consensus disorder prediction 374 397 - -
Dapi4g01786 509 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 13 104 - GO:0005829(PANTHER)|GO:0009903(PANTHER)|GO:0009904(PANTHER)
Dapi4g01786 509 MobiDBLite consensus disorder prediction 34 55 - -
Dapi4g01786 509 Pfam Weak chloroplast movement under blue light 13 103 IPR008545 -
Dapi4g01786 509 Pfam Weak chloroplast movement under blue light 154 381 IPR008545 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi4g01786 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
260239 Dapi20g01725 Dapi4g01786
264842 Dapi4g01786 Dapi20g01725
385537 Dapi20g01725 Dapi4g01786
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1941150 Dapi Dapi4g01786 Dapi-Chr4:113022103 Dapi13g00496 Dapi-Chr13:8841304
1963133 Dapi Dapi1g00920 Dapi-Chr1:28715818 Dapi4g01786 Dapi-Chr4:113022103
2026241 Dapi Dapi20g01725 Dapi-Chr20:104438372 Dapi4g01786 Dapi-Chr4:113022103
2049572 Dapi Dapi31g02188 Dapi-Chr31:106768305 Dapi4g01786 Dapi-Chr4:113022103