Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01814 | ATGGGAATTTGCTTCTCGTCGACTCGGGCTGATGAAGAGGAGACCAACATTCATACTGAGTTTGCCGGAGGTAATGTGACTCTCATCACTACCAAGAATGCTTGGGACCAAAAGCTGTCAGAAGCAAAGACTCAAGGCAAAATAGTGGTTGGCAACTTCAGTGCATCTTGGTGTGGTCCATGCAAATCAATGGCACCCCACTACATTGAGCTATCAGAGAAGTATCCTTCTCTTATGTTTTTGACCGTAGACGTTGATGAATTAAAGGACTTTAGCACACAAATGGATGTAAAGGCAACCCCAACATTCTTCTTCTTTAAAGATGGTCAACAATTTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCTCCATTGTTGATTCACAACCCCCCACTGCTGATAAGTAA | 423 | 43.03 | MGICFSSTRADEEETNIHTEFAGGNVTLITTKNAWDQKLSEAKTQGKIVVGNFSASWCGPCKSMAPHYIELSEKYPSLMFLTVDVDELKDFSTQMDVKATPTFFFFKDGQQFDKLVGANKPELQKKITSIVDSQPPTADK | 140 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01814 | 140 | SUPERFAMILY | Thioredoxin-like | 21 | 132 | IPR036249 | - | |
| Dapi4g01814 | 140 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Dapi4g01814 | 140 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - | |
| Dapi4g01814 | 140 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Dapi4g01814 | 140 | Pfam | Thioredoxin | 27 | 128 | IPR013766 | - | |
| Dapi4g01814 | 140 | CDD | TRX-family | 39 | 127 | - | - | |
| Dapi4g01814 | 140 | ProSiteProfiles | Thioredoxin domain profile. | 20 | 132 | IPR013766 | - | |
| Dapi4g01814 | 140 | FunFam | Thioredoxin | 23 | 132 | - | - | |
| Dapi4g01814 | 140 | PANTHER | THIOREDOXIN | 24 | 129 | IPR050620 | - | |
| Dapi4g01814 | 140 | Gene3D | Glutaredoxin | 1 | 138 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01814 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 249061 | Dapi31g02037 | Dapi4g01814 | |
| 260251 | Dapi20g01751 | Dapi4g01814 | |
| 264854 | Dapi4g01814 | Dapi20g01751 | |
| 385551 | Dapi20g01751 | Dapi4g01814 | |
| 390169 | Dapi31g02037 | Dapi4g01814 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1918334 | Dapi | Dapi23g01136 | Dapi-Chr23:44032603 | Dapi4g01814 | Dapi-Chr4:114724220 | |
| 1941171 | Dapi | Dapi4g01814 | Dapi-Chr4:114724220 | Dapi7g01133 | Dapi-Chr7:40256964 | |
| 2026259 | Dapi | Dapi20g01751 | Dapi-Chr20:105949536 | Dapi4g01814 | Dapi-Chr4:114724220 | |
| 2049494 | Dapi | Dapi31g02037 | Dapi-Chr31:100898564 | Dapi4g01814 | Dapi-Chr4:114724220 |