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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi4g01821 ATGCATATGAGGCTTCAATTTCGAAGAACAGCGAAGATTGTTCTGCTTATTAGCTTCTTCTGGTGGCCAATTGTTGAATCTCAGATGTCTAATCCTTTGCCAAAGCCTGCTAGGGCTCTTGATGCAACCTTACAGGACTATGCATACCGTGCATTCGATAATCCGCGTACTGGTACTCCCTATGACGGTATTGTCCCGCCGTATTTGACCGGAATTGAGATATCGGCAATGAGGCTTAGAAGCGGTAGTTTGTATCGTAGAGGCGTTCAAACGTTTAAGGAATTCATAATTCCTGTTGGTTTAAGAGAGCAGCCGTATGTGGAGAGACTTGTTTTGGTGTATCAAAACTTAGGGAATTGGTCGACAACTTATTACTCTTTGCCTGGTTACATTTATCTAGCTCCGATATTAGGTCTGCTTGCTTACAATGGTTCAGATTTGTCGGCTTCTAATATACCAGAACTTGATTTCTGGGCTTCTGAGGATGCTATTAGTGTAAAATTTGGAAGAATTGGACCAATACCAGTCGGTTTGGTTGCAAAGTGTGCTTGGTTTGATCTACATGGTCAGGTGAACTTCACAAATTTGTTATCTGGCAATGTATGTTCAACAACTGAACAGGGGCATTTCTCCATTGTAGCTGAATCAGCTGTCGCTCCTGTTTCTGTACCTCCAGCACCACCTGAGTCTGCACCGTCTGAACATACATCTAGTAGTAGAAAGAATGAGTCTAGGGTTTGGGGTATTATTGGGGCAGCAACGGGTGGAACTGCGTTGTTGGTGTTATTAGCATTGTTGATATTGTGGGCATGGCGGTACAAAAAGAGAAAAAGACTGCGCGAGTTGGAAAGGGCTGCAGATGCTGGTGAAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGGCACAAGAACATTGCCGAATTTTGAAAGCGAATTTGATGCTTGA 963 43.72 MHMRLQFRRTAKIVLLISFFWWPIVESQMSNPLPKPARALDATLQDYAYRAFDNPRTGTPYDGIVPPYLTGIEISAMRLRSGSLYRRGVQTFKEFIIPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPILGLLAYNGSDLSASNIPELDFWASEDAISVKFGRIGPIPVGLVAKCAWFDLHGQVNFTNLLSGNVCSTTEQGHFSIVAESAVAPVSVPPAPPESAPSEHTSSSRKNESRVWGIIGAATGGTALLVLLALLILWAWRYKKRKRLRELERAADAGEALRMTRIGSMRAPFALGTRTLPNFESEFDA 320
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi4g01821 320 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 17 318 IPR010605 GO:0016020(PANTHER)
Dapi4g01821 320 MobiDBLite consensus disorder prediction 221 240 - -
Dapi4g01821 320 Pfam Protein of unknown function (DUF1191) 36 214 IPR010605 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi4g01821 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
73010 Dapi11g00132 Dapi4g01821
80497 Dapi27g00133 Dapi4g01821
260257 Dapi20g01759 Dapi4g01821
264860 Dapi4g01821 Dapi20g01759
385558 Dapi20g01759 Dapi4g01821
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1928432 Dapi Dapi28g01594 Dapi-Chr28:96448483 Dapi4g01821 Dapi-Chr4:114882979
1941175 Dapi Dapi4g01821 Dapi-Chr4:114882979 Dapi7g01153 Dapi-Chr7:42104850
1978479 Dapi Dapi1g02156 Dapi-Chr1:121535006 Dapi4g01821 Dapi-Chr4:114882979
1986995 Dapi Dapi11g00132 Dapi-Chr11:2267457 Dapi4g01821 Dapi-Chr4:114882979
2010674 Dapi Dapi17g02729 Dapi-Chr17:138557219 Dapi4g01821 Dapi-Chr4:114882979
2026266 Dapi Dapi20g01759 Dapi-Chr20:106197612 Dapi4g01821 Dapi-Chr4:114882979
2045464 Dapi Dapi27g00133 Dapi-Chr27:2483412 Dapi4g01821 Dapi-Chr4:114882979