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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi4g01822 ATGCCGCGCGCCCCTGACAAATATGGTGCGGAGGAGAAGAAAACTCAAAATATTATCCTTGAAACTCATAATCGGGATCCCAGAATTCAGTCTGCTCAATCTGAGAGGAGCCAAGAGACTCAGCTTCAGGCTTCTCAGCGACGTAAGGTGGCACTAGGAACAGCTGCTAAGGTAAAACAACTTATACGGGAGCTGAAAACCGTGACTGCAGAGCTAACAATTGCAAAAGAACGATGCTGTCAACTAGAAGAAGACAACAAATTGCTTCAAGAGGGTCAAGAAAAGGTAGACCACCCTGCAGATGATGACATGATACGGGTTCAACTAGAGACACTATTAGCGGAGAAGGGGCGTTTGGCACACGAGAATTCTGTATATGCACGTGAGAACAGGTTTTTGAGAGAAATAGTTGAATTCCACCAAATGAAAATGCAAGATATGGTGTATTTTTATGAGGGTATTAAAGAGACCTTCCAAGATCCAGTGGAGGAACCCGTTTCCTCAACCCAGTTTGACAGAGAATCCTTGACTCAACCAGGAACTTAA 546 44.32 MPRAPDKYGAEEKKTQNIILETHNRDPRIQSAQSERSQETQLQASQRRKVALGTAAKVKQLIRELKTVTAELTIAKERCCQLEEDNKLLQEGQEKVDHPADDDMIRVQLETLLAEKGRLAHENSVYARENRFLREIVEFHQMKMQDMVYFYEGIKETFQDPVEEPVSSTQFDRESLTQPGT 181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi4g01822 181 MobiDBLite consensus disorder prediction 1 21 - -
Dapi4g01822 181 MobiDBLite consensus disorder prediction 22 45 - -
Dapi4g01822 181 MobiDBLite consensus disorder prediction 1 45 - -
Dapi4g01822 181 MobiDBLite consensus disorder prediction 162 181 - -
Dapi4g01822 181 Coils Coil 58 78 - -
Dapi4g01822 181 PANTHER UNCHARACTERIZED 22 170 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi4g01822 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
73012 Dapi11g00133 Dapi4g01822
80499 Dapi27g00134 Dapi4g01822
249063 Dapi31g02039 Dapi4g01822
260258 Dapi20g01760 Dapi4g01822
264861 Dapi4g01822 Dapi20g01760
385560 Dapi20g01760 Dapi4g01822
390171 Dapi31g02039 Dapi4g01822
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1941176 Dapi Dapi4g01822 Dapi-Chr4:114886559 Dapi7g01588 Dapi-Chr7:75433908
1986996 Dapi Dapi11g00133 Dapi-Chr11:2273136 Dapi4g01822 Dapi-Chr4:114886559
2026267 Dapi Dapi20g01760 Dapi-Chr20:106200182 Dapi4g01822 Dapi-Chr4:114886559
2045465 Dapi Dapi27g00134 Dapi-Chr27:2487877 Dapi4g01822 Dapi-Chr4:114886559
2049496 Dapi Dapi31g02039 Dapi-Chr31:100926583 Dapi4g01822 Dapi-Chr4:114886559