AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01827 | ATGGATATCGAAAAGAGAGACGAACAACCTCTCAGATCCGTCCCCGTCTCCGCCGCCGACGATCCTTCCCGGAACCTCAAACGCCGTAGATGCATCATCATCTCCTCATCAATAACCGGAGTAATCCTCACCATAGCTCTAATCCTCCTCATATTAGGCCTCACAGTCTTCAAACCCAAAAAACCAATCCTAACCGTCAATTCCGTCCAGATTCAAGACCTAGACGTCTCCGTTATTCCAATTCCGATTCAAGTTTCATTAAACCTATCACTCGCACTCAATATCTCAATTCAAAACCCTAACAAGGTCAGTATTAAGTACCAGAGCAGCTCCGCCGCTATCCGGTATAAAGGAAACGACGTCGGCAACGTTCCGTTTCCTGACGGACGAATTGGATCTGACGGTAAAGCGGAATTGAATCTGACGCTAACGGTTTTCGCCGATCGGTTAGTTTCTGATTCCGAGATCTATAGTGATATTATTGGAGGTAACTTGCCGTTTACGACTTATACTAAAATTAAGGCGAAAGTTCGTGTGGTTTTTTTCTATATTCATGTCACGTCGACGTCCACGTGTGATGTGAATATTGATGTGCAATCGAGAAGTATTGCGAATCAGACTTGCCATTACAAGAATAAGATTTAG | 645 | 44.19 | MDIEKRDEQPLRSVPVSAADDPSRNLKRRRCIIISSSITGVILTIALILLILGLTVFKPKKPILTVNSVQIQDLDVSVIPIPIQVSLNLSLALNISIQNPNKVSIKYQSSSAAIRYKGNDVGNVPFPDGRIGSDGKAELNLTLTVFADRLVSDSEIYSDIIGGNLPFTTYTKIKAKVRVVFFYIHVTSTSTCDVNIDVQSRSIANQTCHYKNKI | 214 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01827 | 214 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Dapi4g01827 | 214 | Pfam | Late embryogenesis abundant protein | 95 | 188 | IPR004864 | - | |
| Dapi4g01827 | 214 | Gene3D | - | 52 | 197 | - | - | |
| Dapi4g01827 | 214 | SUPERFAMILY | LEA14-like | 44 | 153 | - | - | |
| Dapi4g01827 | 214 | SMART | why | 74 | 194 | IPR013990 | GO:0009269(InterPro) | |
| Dapi4g01827 | 214 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 18 | 208 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01827 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 73019 | Dapi11g00142 | Dapi4g01827 | |
| 80504 | Dapi27g00142 | Dapi4g01827 | |
| 249064 | Dapi31g02041 | Dapi4g01827 | |
| 260261 | Dapi20g01764 | Dapi4g01827 | |
| 264864 | Dapi4g01827 | Dapi20g01764 | |
| 385564 | Dapi20g01764 | Dapi4g01827 | |
| 390172 | Dapi31g02041 | Dapi4g01827 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1912612 | Dapi | Dapi20g01764 | Dapi-Chr20:106370042 | Dapi4g01827 | Dapi-Chr4:115068970 | |
| 1936369 | Dapi | Dapi31g02041 | Dapi-Chr31:100997686 | Dapi4g01827 | Dapi-Chr4:115068970 | |
| 1941181 | Dapi | Dapi4g01827 | Dapi-Chr4:115068970 | Dapi7g01797 | Dapi-Chr7:91944600 | |
| 1952470 | Dapi | Dapi4g01825 | Dapi-Chr4:115049619 | Dapi4g01827 | Dapi-Chr4:115068970 |