Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01848 | ATGAACAGCAATCAAGCAGGAGCCTCATCCAAAGCGAGAGTTGGATCATCCCAGCCTTCAGAAACATCATTCAAACGCAAGCGAGGGGTTTTCCAGAAAGATTTACAGCATATGATGTATGGTTTTGGAGATGATCCTAATCCGCTGCCGGAGACCGTTGCTCTTGTGGAGGATATTGTTGTTGAGTACGTGACAGATATGGTGCATAAAGCCCAAGACGTTGCATCAAAGAGGGGAAAGCTTTTGACTGAGGATTTCTTGTTCTTGATCCGCAAGGACTTGCCCAAGTTAAACCGTTGTACAGAACTACTGTCAATGAATGAAGAACTGAAACAAGCAAGGAAAGCATTCGATGTCGATGAAGAGAAATTGGCATCGGCAGAGTGA | 387 | 44.7 | MNSNQAGASSKARVGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDMVHKAQDVASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLASAE | 128 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01848 | 128 | CDD | TAF13 | 28 | 118 | IPR003195 | GO:0006366(InterPro) | |
| Dapi4g01848 | 128 | PANTHER | TRANSCRIPTION INITIATION FACTOR TFIID-SUPT3-RELATED | 6 | 125 | IPR003195 | GO:0006366(PANTHER)|GO:0006366(InterPro) | |
| Dapi4g01848 | 128 | Coils | Coil | 103 | 123 | - | - | |
| Dapi4g01848 | 128 | Gene3D | Histone, subunit A | 30 | 74 | IPR009072 | GO:0046982(InterPro) | |
| Dapi4g01848 | 128 | FunFam | Transcription initiation factor TFIID subunit 13 | 30 | 74 | - | - | |
| Dapi4g01848 | 128 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Dapi4g01848 | 128 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Dapi4g01848 | 128 | SUPERFAMILY | Histone-fold | 31 | 73 | IPR009072 | GO:0046982(InterPro) | |
| Dapi4g01848 | 128 | Pfam | Transcription initiation factor IID, 18kD subunit | 30 | 118 | IPR003195 | GO:0006366(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01848 | K03127 | transcription initiation factor TFIID subunit 13 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260271 | Dapi20g01786 | Dapi4g01848 | |
| 264874 | Dapi4g01848 | Dapi20g01786 | |
| 385576 | Dapi20g01786 | Dapi4g01848 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2026285 | Dapi | Dapi20g01786 | Dapi-Chr20:106840185 | Dapi4g01848 | Dapi-Chr4:115714901 |