Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dapi4g01875	ATGGGGCATACATTCCCGGAGGAGGTATTGGAGCATGTTTTTTCCTTTATTACGGCACATACTGACCGGAATGTTGTATCGTTGGTGTGTAAGTCGTGGTATGAGATCGAGCGGTGGTGCCGGAGGAGGATATTTATCGGAAACTGTTATGCGGTGAGTCCGAGTATTATGATAAGGAGGTTTCCGGAGGTGAGATCTGTGGAGTTGAAAGGGAAGCCGCATTTTGCGGACTTTAATTTGGTGCCGGACGGTTGGGGCGGTTATTTTTATCCGTGGATCTGTGAGATGGCTAGGGTTTATCCGTGGTTGGAGGAGATTAGGCTTAAGAGAATGGTGGTTACTGATGAGAGCTTGGAATTGATAGCGAAATCGTTTAAGAACTTTAAGGTGTTGGTTTTGTCGTCTTGTGAGGGTTTTAGTACCGACGGACTTGCTTCCATTGCTGCCAATTGCAGAAATCTGAGAGAATTGGATTTGAAGGAGAGTGAAGTGGAGGATCTGAGTGGGCATTGGCTAAGTCATTTTCCTGATTCTTGCACTTCATTGCAGTCACTTAACATGTCTTGTTTGGTTACTGAGGTGAATTTTTCAGCCCTCCTACGCCTCATTGCTCGGTCACCGAACCTAAAGACTCTCCGGCTCAATCGAGCTGTTCCCCTTGAAAAACTCTCCACCCTACTCCACCGGGCCCCGCAGCTTGTTGAATTGGGGACTGGTGCTTATTCTGCTGAAATTCGATCGGATGTGTACGCAAATTTAGCAGAGGCGTTCTCTAGCTGCAAGGAACTTAAGGGTCTTACTGGGTTTTGGGATGTTGTTCCTTCTTATCTTCCGGCTTTTTATTCTGTTTGTCCTAGACTCACTTCTTTGAATTTGAGTTATGCCACTATTCAAAGCCCGGATGTTACCAAAATCATCACTCAGTGTCCTAATCTGCAGAGTTTATCGGTGCTGGATTATATTGAAGACACCGGGCTTGATGCCCTTTCGTTATCCTGTAAGGACTTGAGAGAACTTAGGGTTTTCCCATCTGACCCGTTTGTAGCGGATGCAAATGTAGCCTTAACAGAACAAGGTCTGGTTGCAGTTTCTGAAGGGTGTTCCAAGCTCCAATCTGTTCTTTATTTCTGTAGACAGATGTCAAATTCTGCATTGACCACCATTGCTAAGAACCGTCCTAACCTTACCTGTTTCCGTCTATGCATTCTCGAACCAAGAGCCCCTGATTACCTAACCTTAGAACCACTTGACCATGGTTTTGGAGCCATAGTTGACCACTGTAAACAACTTCAACGTCTGTCATTATCCGGTTTGCTGACAGACCGTGTGTTTGAGTACATTGGGAAACGGGCTAAGAGATTAGAAATGCTTTCAATAGCCTTTGCTGGTGATAGTGATTTGGGCTTGCATCATGTGTTATCGGGCTGTGACAGCTTACGGAAGCTTGAGATTAGAGATTGCCCGTTCGGGGACAAGGCTTTGTTGGCTAATGTTTCCAAATTGGAGACAATGCGATCCCTTTGGATGTCTTCGTGCTCGGTTAGTCTCGGTGCATGTAAGCGGCTGAGTCAGAAGATGCCTAGGCTTAATGTTGAAGTTATTGATGAGCAGGGAGACCTTGACTCCAGACCTGATAATTGCCCTGTTGAGAAACTTTATATATACCGCACGGTTGCTGGGCCTCGGTTTGACATGCCTAGCTTTATACGAACTATGAATCAGAACCCTACATATAGGAGATAG	1743	45.67	MGHTFPEEVLEHVFSFITAHTDRNVVSLVCKSWYEIERWCRRRIFIGNCYAVSPSIMIRRFPEVRSVELKGKPHFADFNLVPDGWGGYFYPWICEMARVYPWLEEIRLKRMVVTDESLELIAKSFKNFKVLVLSSCEGFSTDGLASIAANCRNLRELDLKESEVEDLSGHWLSHFPDSCTSLQSLNMSCLVTEVNFSALLRLIARSPNLKTLRLNRAVPLEKLSTLLHRAPQLVELGTGAYSAEIRSDVYANLAEAFSSCKELKGLTGFWDVVPSYLPAFYSVCPRLTSLNLSYATIQSPDVTKIITQCPNLQSLSVLDYIEDTGLDALSLSCKDLRELRVFPSDPFVADANVALTEQGLVAVSEGCSKLQSVLYFCRQMSNSALTTIAKNRPNLTCFRLCILEPRAPDYLTLEPLDHGFGAIVDHCKQLQRLSLSGLLTDRVFEYIGKRAKRLEMLSIAFAGDSDLGLHHVLSGCDSLRKLEIRDCPFGDKALLANVSKLETMRSLWMSSCSVSLGACKRLSQKMPRLNVEVIDEQGDLDSRPDNCPVEKLYIYRTVAGPRFDMPSFIRTMNQNPTYRR	580

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dapi4g01875	580	CDD	F-box-AtTIR1-like	5	41	-	-
	Dapi4g01875	580	SUPERFAMILY	RNI-like	65	530	-	-
	Dapi4g01875	580	Pfam	F-box	4	43	IPR041567	-
	Dapi4g01875	580	Gene3D	Ribonuclease Inhibitor	42	572	IPR032675	-
	Dapi4g01875	580	PANTHER	F-BOX-TPR REPEAT PROTEIN POF3	308	537	-	GO:0019005(PANTHER)\|GO:0031146(PANTHER)
	Dapi4g01875	580	Gene3D	-	1	41	-	-
	Dapi4g01875	580	SMART	fbox-2	5	46	IPR001810	GO:0005515(InterPro)
	Dapi4g01875	580	Pfam	Transport inhibitor response 1 protein domain	62	108	IPR041101	-
	Dapi4g01875	580	SUPERFAMILY	F-box domain	5	42	IPR036047	GO:0005515(InterPro)
	Dapi4g01875	580	FunFam	Transport inhibitor response 1	42	572	-	-
	Dapi4g01875	580	SMART	LRR-CC-2	476	500	IPR006553	-
	Dapi4g01875	580	SMART	LRR-CC-2	367	391	IPR006553	-
	Dapi4g01875	580	SMART	LRR-CC-2	309	332	IPR006553	-
	Dapi4g01875	580	SMART	LRR-CC-2	125	150	IPR006553	-
	Dapi4g01875	580	SMART	LRR-CC-2	179	205	IPR006553	-
	Dapi4g01875	580	SMART	LRR-CC-2	100	124	IPR006553	-
	Dapi4g01875	580	SMART	LRR-CC-2	427	450	IPR006553	-
	Dapi4g01875	580	FunFam	Transport inhibitor response 1	1	41	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dapi4g01875	K14485	transport inhibitor response 1

Event-related genes

Select	Gene_1	Gene_2	Event_name
	260274	Dapi20g01828	Dapi4g01875
	264877	Dapi4g01875	Dapi20g01828
	385584	Dapi20g01828	Dapi4g01875

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Dapi	Dapi-Chr18:2430004	Dapi4g01875	Dapi-Chr4:116752302	dispersed
	Dapi	Dapi-Chr25:1094590	Dapi4g01875	Dapi-Chr4:116752302	dispersed
	Dapi	Dapi-Chr2:2502532	Dapi4g01875	Dapi-Chr4:116752302	dispersed
	Dapi	Dapi-Chr4:116752302	Dapi5g00707	Dapi-Chr5:22937440	dispersed
	Dapi	Dapi-Chr1:123744290	Dapi4g01875	Dapi-Chr4:116752302	wgd
	Dapi	Dapi-Chr17:141441554	Dapi4g01875	Dapi-Chr4:116752302	wgd
	Dapi	Dapi-Chr20:108420699	Dapi4g01875	Dapi-Chr4:116752302	wgd
	Dapi	Dapi-Chr27:4652424	Dapi4g01875	Dapi-Chr4:116752302	wgd