Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01917 | ATGGATTTCTTTAGATCTATATTATCAGATGATCCAGAGCCTGAAACTCCACATAATTACGAAGATTCCGATACAGATCCGCGCCAAAATCAATCGCCAAAACATCATTTAACGGAAGGCGATGAAGACGACGATTCCACTTCCAATATTAATTCGTCAGAAGACGGCAGCGGCAGCGGCAGTGGCGGTGGCGGTGGCGGTGGCGGTTTATGGACCTTCGGAGATCTAGTCAAAACGTTGACCACAAAATCCGAATCAGTATTCGATACGTACCGTCGAGATCTGAAGGAATTCGGATCCGGTTTACGGAAGGAATCGGATCTGTTCCGTGAAGTTGCGAGCCGTGCGGTGAAGGAGTTGCCGGCGTCAATTGACGCCGGTACGTCGGCGATTGACGGAGTATTGAAATCCACGGCGGATATTATAGCGCAAGGTAAGGAAGCTCTTCTTTCACCTTCTGATGTTGATGATTCTGATTATTCTGATAGACATGCTTATAGTGATCGTAGTGGTTTGGATTCGGTTAGGTATAGTCGTTTTGATGCTCAATTGAATGCGATTAGGAGTGATGTAAGAACTTACTGTGAGGATCCTGAGGATTTAGATGATTATAATAAGTGGAAGTTAGGGTTTGTGGTTGGAGATAAGAAGGATGAGATTGAGGAGTTAGTTGGAGAGAATGGAGGATTAGAGGAAATCTATTTAAAACTTGTTCCGAGTGAGGTCGATGATGCGACGTTTTGGTTTAGGTATTATTATAAGGTACATAAGCTTGTACAGCAGGAGGAAATGAGAGCTAAGCTTGTGAAGAGATCGTTGTCGGTAGATGATGAAGAGGAATTAAGTTGGGACGTTGATGATGATGTTGATGAGGATGAAGTTAATACTCGGAGTTCCAAGATTGTTGATGAAGAAGATAAGGAGATGGCGAGCAATGTGGTTAGTGTTGATAAGAACATTGTTGAGGAAGCTAAATCAGTGCCGAAAGCTGATGAAAAGGTTGAAACTAAAGATAATAATGTCGCAGTTGAATCAAACGAATCTTTAATTCAGGAGGATGAAGATCTCGAGTGGGATGAGATTGAAGATATTGGGAAAACTGATGACAAGAACGTGTCTCGTGGTGACTTGACAGACAAAGGCGAGTTGCGTAAGCGATTGAGTACTGCTGCAGATGACGAGGAGGATTTGAGTTGGGATATTGAAGATGACGATGAGCCTGTAAAGCAAGGAGAGGTTCTTTTGCTTTGCTGGGCTCTCGTGTTGGGATGGGCTGTTTTTTCCATGCAGGCCGAAGCCTGCTGCATATTGGGCCGAGAGGCTGCTGCCCAAGCTTCCAATTCTTCATTTTCAGCTTAA | 1359 | 44.0 | MDFFRSILSDDPEPETPHNYEDSDTDPRQNQSPKHHLTEGDEDDDSTSNINSSEDGSGSGSGGGGGGGGLWTFGDLVKTLTTKSESVFDTYRRDLKEFGSGLRKESDLFREVASRAVKELPASIDAGTSAIDGVLKSTADIIAQGKEALLSPSDVDDSDYSDRHAYSDRSGLDSVRYSRFDAQLNAIRSDVRTYCEDPEDLDDYNKWKLGFVVGDKKDEIEELVGENGGLEEIYLKLVPSEVDDATFWFRYYYKVHKLVQQEEMRAKLVKRSLSVDDEEELSWDVDDDVDEDEVNTRSSKIVDEEDKEMASNVVSVDKNIVEEAKSVPKADEKVETKDNNVAVESNESLIQEDEDLEWDEIEDIGKTDDKNVSRGDLTDKGELRKRLSTAADDEEDLSWDIEDDDEPVKQGEVLLLCWALVLGWAVFSMQAEACCILGREAAAQASNSSFSA | 452 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01917 | 452 | SMART | wurzfinal6 | 207 | 259 | IPR005607 | - | |
| Dapi4g01917 | 452 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Dapi4g01917 | 452 | PANTHER | SYNAPSE-ASSOCIATED PROTEIN | 26 | 400 | IPR051494 | GO:0005737(PANTHER) | |
| Dapi4g01917 | 452 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
| Dapi4g01917 | 452 | Pfam | BSD domain | 207 | 263 | IPR005607 | - | |
| Dapi4g01917 | 452 | SUPERFAMILY | BSD domain-like | 176 | 265 | IPR035925 | - | |
| Dapi4g01917 | 452 | Gene3D | BSD domain | 168 | 270 | IPR035925 | - | |
| Dapi4g01917 | 452 | ProSiteProfiles | BSD domain profile. | 207 | 259 | IPR005607 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01917 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260301 | Dapi20g01866 | Dapi4g01917 | |
| 264904 | Dapi4g01917 | Dapi20g01866 | |
| 385620 | Dapi20g01866 | Dapi4g01917 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr26:8610755 | Dapi4g01917 | Dapi-Chr4:117929419 | dispersed | |
| Dapi | Dapi-Chr32:10847534 | Dapi4g01917 | Dapi-Chr4:117929419 | dispersed | |
| Dapi | Dapi-Chr18:25305234 | Dapi4g01917 | Dapi-Chr4:117929419 | transposed | |
| Dapi | Dapi-Chr6:44393890 | Dapi4g01917 | Dapi-Chr4:117929419 | transposed | |
| Dapi | Dapi-Chr20:109790515 | Dapi4g01917 | Dapi-Chr4:117929419 | wgd |