Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01940 | ATGGCCTCTTTGACACGTGTCCTCCTTCCACAATTTCCCCAATGCAACAATTCTACCGGTTCCATTTCCATTAAGCTAAACCCTAGCGCTTCCAGAAGGCGATTCTCAGTTTTCTCCATGGCGGAATCCAACCGTACCACCGTCCTCGTCACCGGAGCCGGCGGCCGAACCGGTCAAATTGTTTATAAGAAGCTTAAGGAGAGGTCAGGGGAGTATATTGCACGAGGTTTGGTTAGAAGCGAGGAGAGTAAGGAGAAAATTGGCGGAGCCGATGACGTATTGATAGGAGATATAACGAACGCAGGAAGTCTTGTTCCGGCTATTGAAGGCACAGATGCTATTGTTATTCTTACCAGTGCAGTCCCGAAAATGAAACCTGGTTTTGATCCAACTAAAGGTGGAAGACCTGAATTCTATTTTGAAGAGGGATCGTTTCCTGAGCAAGTTGACTGGGAAGGGCAAAAGAATCAAATAGATGCCGCTAAAGCCGCTGGAGTGAAGCACATTGTACTGGTTGGGTCCATGGGTGGAACAAATATTAACCATCCTTTAAACAGCCTCGGAAACGGGAATATACTGGTCTGGAAGAGAAAGGCTGAACAGTATCTAGCAGATTCTGGGATTCCATACACGATTATAAGGGCTGGGGGTTTGCAAGACAAGGAAGGTGGTGTTCGGGAGCTGCTGGTGGGAAAAGATGATGAGCTTCTTCAGACCGAAACTAAAACCATTGCCCGAGCAGATGTGGCTGAAGTCTGTATACAGGCGTTGCAATTTGAGGAGGCGAAGTTTAAGGCATTTGATCTTGCCTCCAAACCTGAGGGAAGTGGGACGCCGACAAAAGACTTCAAGAGCTTATTTTCCCAGGTCACTACTCGGTTTTAA | 885 | 47.23 | MASLTRVLLPQFPQCNNSTGSISIKLNPSASRRRFSVFSMAESNRTTVLVTGAGGRTGQIVYKKLKERSGEYIARGLVRSEESKEKIGGADDVLIGDITNAGSLVPAIEGTDAIVILTSAVPKMKPGFDPTKGGRPEFYFEEGSFPEQVDWEGQKNQIDAAKAAGVKHIVLVGSMGGTNINHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELLVGKDDELLQTETKTIARADVAEVCIQALQFEEAKFKAFDLASKPEGSGTPTKDFKSLFSQVTTRF | 294 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01940 | 294 | PANTHER | NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED | 41 | 294 | IPR044163 | GO:0009507(PANTHER)|GO:0016491(InterPro) | |
| Dapi4g01940 | 294 | FunFam | Uncharacterized protein At5g02240 | 44 | 294 | - | - | |
| Dapi4g01940 | 294 | CDD | SDR-a5 | 47 | 269 | - | - | |
| Dapi4g01940 | 294 | Pfam | NAD(P)H-binding | 52 | 258 | IPR016040 | - | |
| Dapi4g01940 | 294 | Gene3D | - | 43 | 294 | - | - | |
| Dapi4g01940 | 294 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 46 | 272 | IPR036291 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01940 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260313 | Dapi20g01885 | Dapi4g01940 | |
| 264916 | Dapi4g01940 | Dapi20g01885 | |
| 385636 | Dapi20g01885 | Dapi4g01940 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr20:16905119 | Dapi4g01940 | Dapi-Chr4:118631334 | dispersed | |
| Dapi | Dapi-Chr23:3739152 | Dapi4g01940 | Dapi-Chr4:118631334 | dispersed | |
| Dapi | Dapi-Chr4:18483279 | Dapi4g01940 | Dapi-Chr4:118631334 | dispersed | |
| Dapi | Dapi-Chr4:118631334 | Dapi7g00158 | Dapi-Chr7:3229169 | dispersed | |
| Dapi | Dapi-Chr20:110667899 | Dapi4g01940 | Dapi-Chr4:118631334 | wgd |