Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g01944 | ATGGATATCCTGAAAGAAGAGTTACTAAAGAAAAGGAAAACTCTCGCCGAACAGACCGGCGGCCGTAAGGTCTTCAAGCGTTCCGAAATCGAACAGAAACGAATCCAAGACCTTCGCGAAGAAGAAAAACGAGACGCCGAAGCCAAACGCCTCCGTCAAAACCAAAACCAAAACAATCCTAACTCATCCGATCCAAACTCCTCATCAAACCCTAACTCCAACCTCGATTCCACCAACTCCAAACCTGAATCCGGCGCCAGCTCATCTTCCAAAGCCGTTATAACCGACGAACAGAAAATCGACTCACTAAACCTACCTAAACCGGAGGTTATTCGTCGCCTCCGGTTTTTAAAACAACCGGTTACTTTGTTTGGAGAGAGTGACGATGACCGGTTGGACCGGTTGAAATACGTATTGAAAGCCGGTTTATTTGAGCTTGACGATAGTGATATGACGGAAGGGCAAACGAATGATTTTTTACGAGATATTGTTGAATTAAAGAAGAGGCAGAAGTCAGGGATAATAAGTGAACGGAAACGGAGGGCGAATGAGGAGTCTACTGAGGATAAGGATGGAGGAGGAGGTGAGGATGATGTTAGTGGCGATGGCGGTTCGTCTGGTAATGATCAGGATAAGGATTTTAAACGAATGAAGGCGAATTTTGTTGAGCTTTGTGATGAGGATAAGATTTTAGTGTTTTTTAAGAAGTTGTTGATTGAGTGGAATCAGGAGTTGGATGAGATGACTGAAACTGAGAAGAGGACTGCGAAAGGGAAGTCGACTTTTGCTACTTTTAAGCAGTGCGCGAGGTATTTGAATCCGCTGTTCAAGTTCTGCAGGAAGAAGGTTCTGCCTGATGACATTAGACAAGCATTAATGCTAGTGGTGAACTGCTGCATGAAGCGAGATTACTTAGCTGCAATGGATCATTACATCAGAATGGCAATCGGGAACGCACCATGGCCCATTGGTGTTACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAAAAAATTTACACCAACAGTGTGGCCCACGTGATGAACGACGAAACAACTCGAAAATATTTGCAGTCGGTTAAACGATTAATGACATTTTGTCAAAGACGTTACCCAACAATGCCTTCTAAGGCGGTGGAGTTTAATAGTTTGGCAAATGGTAGTGACTTGCAAGCTTTATTGGCAGAGGAAAGGAGGAATGCATCAGGTGGAAGTCAACAACAAGAAGATAGACTTATGTTGATGCCTCCACCGGCACCAAAGGATGGCTAA | 1272 | 44.26 | MDILKEELLKKRKTLAEQTGGRKVFKRSEIEQKRIQDLREEEKRDAEAKRLRQNQNQNNPNSSDPNSSSNPNSNLDSTNSKPESGASSSSKAVITDEQKIDSLNLPKPEVIRRLRFLKQPVTLFGESDDDRLDRLKYVLKAGLFELDDSDMTEGQTNDFLRDIVELKKRQKSGIISERKRRANEESTEDKDGGGGEDDVSGDGGSSGNDQDKDFKRMKANFVELCDEDKILVFFKKLLIEWNQELDEMTETEKRTAKGKSTFATFKQCARYLNPLFKFCRKKVLPDDIRQALMLVVNCCMKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHVMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQALLAEERRNASGGSQQQEDRLMLMPPPAPKDG | 423 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g01944 | 423 | Coils | Coil | 38 | 58 | - | - | |
| Dapi4g01944 | 423 | MobiDBLite | consensus disorder prediction | 394 | 423 | - | - | |
| Dapi4g01944 | 423 | PANTHER | PRE-MRNA SPLICING FACTOR-RELATED | 1 | 384 | IPR039979 | GO:0000350(PANTHER)|GO:0005682(PANTHER)|GO:0008380(InterPro)|GO:0046540(PANTHER)|GO:0071021(PANTHER) | |
| Dapi4g01944 | 423 | MobiDBLite | consensus disorder prediction | 16 | 95 | - | - | |
| Dapi4g01944 | 423 | MobiDBLite | consensus disorder prediction | 16 | 51 | - | - | |
| Dapi4g01944 | 423 | SUPERFAMILY | PRP4-like | 97 | 140 | IPR036285 | - | |
| Dapi4g01944 | 423 | Gene3D | - | 77 | 158 | IPR036285 | - | |
| Dapi4g01944 | 423 | FunFam | Pre-mRNA-splicing factor 18 | 78 | 155 | - | - | |
| Dapi4g01944 | 423 | SMART | pr04-2 | 105 | 157 | IPR014906 | - | |
| Dapi4g01944 | 423 | Gene3D | Functional domain of the splicing factor Prp18 | 206 | 375 | - | - | |
| Dapi4g01944 | 423 | MobiDBLite | consensus disorder prediction | 175 | 197 | - | - | |
| Dapi4g01944 | 423 | MobiDBLite | consensus disorder prediction | 52 | 95 | - | - | |
| Dapi4g01944 | 423 | MobiDBLite | consensus disorder prediction | 175 | 211 | - | - | |
| Dapi4g01944 | 423 | Pfam | pre-mRNA processing factor 4 (PRP4) like | 110 | 137 | IPR014906 | - | |
| Dapi4g01944 | 423 | FunFam | Pre-mRNA-splicing factor 18 | 204 | 375 | - | - | |
| Dapi4g01944 | 423 | Pfam | Prp18 domain | 232 | 373 | IPR004098 | GO:0005681(InterPro)|GO:0008380(InterPro) | |
| Dapi4g01944 | 423 | SUPERFAMILY | Functional domain of the splicing factor Prp18 | 208 | 373 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g01944 | K12817 | pre-mRNA-splicing factor 18 |