AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi4g01977 ATGGACAGTTTATGGCAGGAATACAACACCGCCGGCGCCTTTCAGTTACCGGAGAGTCCAAGGAAGCCGATGGAGTTCTTATCGAGGTCATGGAGCGACGCTACTCTTAAAACTCTGCATTCTCCGCCGTCTCCGTTGATTTCAATTTCCAAGCCGGTTAACAGAACCAGCACAAATTCGAATATTCCGTCGGCGGAGACTAACGGCGGTTTCGGCGGCGACGCGGCGGAGGAGTCCGTTACGACGGAGACGCTTTCCGGTAACACGTTTTCGTTCGCTTCATCTGCGACTTCTCAACTCGTACTTGAACGAATCATGTCTCAATCGGATCTATCGCCGTTAGCTTCAGGGAGACTGTCACACAGTAGTGGACCACTGAATCCGTCGCACATGGAGGAAACCGACAGTCCACATATCTCACCGTCCGACGAGTACGACGACGTCGTTAAGTTTTTGCGCGCCAACAACACCTTGCAACCGTTGTTTGCCAATGGCCGGAGTGGATATGGTGCGGGTGGGAGTAGCGCCACGCCTGCTGGAAAGACGGTCGGGCGGTGGTTAAAGGAGAGGAGAGAGAAAAAGAAAGAAGAGACCCGAGCGCACAACGCGCAGCTCCATGCGGCGGTCTCTGTTGCTGGAGTGGCGGCTGCAGTGGCCACCATTGCGGCTGCTACTGCAGCCGCGTCAGCGTCAAGTAAAGATGAGCATATGGCCAAGACTAATATGGCGGTGGCCTCGGCTGCCACTTTGGTGGCTGCACAGTGTGTGGAGGCGGCGGAGGCGATGGGGGCTGAACGAGAACACCTTGTGGCCGCTGTTAGCTCTGCGGTTAATGTCAAATCCCATGGAGATATATTAACTCTCACCGCTGCGGCTGCAACTGCTCTACGTGGCGCAGCGACGTTGAAGGCAAGGGCATTAAAGGAAGTATGGAACATCGCAGCGGTGATCCCAGTGGACCGAGGACTTAAAGAAAGTAAAAGCCAAGGAAAGAACAGTGGCTATTCTGAACAGACTCCATCTGAAGAGAACTTTTTGGGTATTTGTAACCAAGAACTCCTAGCCCGGGGGAGTGAGCTTCTCAAACGCACCCGTAACGGGGATCTTCACTGGAAAATTGTGTCGGTTTACATCCATCGAACGGGTCAAGTAATGCTAAAGATGAAGAGTAAACATGTTGGTTCTACAATAACAAAAAAGAAGAAAAATGTGGTGTTGGAGGTGTGCAAGAACATGTCGGCGTGGCCCGGTAGACATCTATTTGACGGCGGGGAGGAGCGGCATTATTTCGGGTTGAGGACCGTAGGACGTGGAATGGTTGAGTTCGAGTGTAGGACACAAAGAGAATATGATATGTGGACTCAAGGTGTTTCTAGGCTTCTTGCCATTGTAGAAGAAAGGAAGTCAATCAAGTAA 1416 51.98 MDSLWQEYNTAGAFQLPESPRKPMEFLSRSWSDATLKTLHSPPSPLISISKPVNRTSTNSNIPSAETNGGFGGDAAEESVTTETLSGNTFSFASSATSQLVLERIMSQSDLSPLASGRLSHSSGPLNPSHMEETDSPHISPSDEYDDVVKFLRANNTLQPLFANGRSGYGAGGSSATPAGKTVGRWLKERREKKKEETRAHNAQLHAAVSVAGVAAAVATIAAATAAASASSKDEHMAKTNMAVASAATLVAAQCVEAAEAMGAEREHLVAAVSSAVNVKSHGDILTLTAAAATALRGAATLKARALKEVWNIAAVIPVDRGLKESKSQGKNSGYSEQTPSEENFLGICNQELLARGSELLKRTRNGDLHWKIVSVYIHRTGQVMLKMKSKHVGSTITKKKKNVVLEVCKNMSAWPGRHLFDGGEERHYFGLRTVGRGMVEFECRTQREYDMWTQGVSRLLAIVEERKSIK 471
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi4g01977 471 PANTHER EXPRESSED PROTEIN 16 466 IPR040269 GO:0009734(PANTHER)|GO:0010087(PANTHER)|GO:0010305(PANTHER)
Dapi4g01977 471 Pfam Plant pleckstrin homology-like region 359 464 IPR013666 -
Dapi4g01977 471 MobiDBLite consensus disorder prediction 113 135 - -
Dapi4g01977 471 MobiDBLite consensus disorder prediction 42 80 - -
Dapi4g01977 471 MobiDBLite consensus disorder prediction 113 143 - -
Dapi4g01977 471 Pfam Auxin canalisation 17 321 IPR008546 -
Dapi4g01977 471 MobiDBLite consensus disorder prediction 42 67 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi4g01977 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
82281 Dapi4g01977 Dapi7g02499
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr12:106659436 Dapi4g01977 Dapi-Chr4:119801128 dispersed
Dapi Dapi-Chr4:119801128 Dapi6g00231 Dapi-Chr6:3491956 dispersed
Dapi Dapi-Chr4:119801128 Dapi7g02499 Dapi-Chr7:110574439 wgd