Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g02023 | ATGTTCTTCAATGCACAATCAATAATGTCAACCGACTGTCAAGGAAAGAGTTCATGGCCGGAGCTTGTAGGGGCAAGGGGAGAAGCAGCGGCCGCTAGGATTGAGGAAGAGAATCCTCTGGTCGATGCTATCGTCGTAGTAGAGGGAAGGGATAATGTCATTCTTGATGTTCGATGCAACCGCGTGTGGGTCTGGGTGAACTCTAATGCGGTGGTTGTTCGAACTCCTTCCATTGGCTAA | 240 | 49.58 | MFFNAQSIMSTDCQGKSSWPELVGARGEAAAARIEEENPLVDAIVVVEGRDNVILDVRCNRVWVWVNSNAVVVRTPSIG | 79 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g02023 | 79 | ProSitePatterns | Potato inhibitor I family signature. | 19 | 30 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Dapi4g02023 | 79 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 12 | 79 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Dapi4g02023 | 79 | Pfam | Potato inhibitor I family | 16 | 79 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Dapi4g02023 | 79 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 13 | 79 | IPR036354 | - | |
| Dapi4g02023 | 79 | Gene3D | Trypsin Inhibitor V, subunit A | 9 | 78 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g02023 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr4:121826433 | Dapi4g02023 | Dapi-Chr4:122006556 | dispersed | |
| Dapi | Dapi-Chr4:122006556 | Dapi4g02025 | Dapi-Chr4:122108115 | dispersed | |
| Dapi | Dapi-Chr4:121999427 | Dapi4g02023 | Dapi-Chr4:122006556 | tandem | |
| Dapi | Dapi-Chr4:122006556 | Dapi4g02024 | Dapi-Chr4:122013762 | tandem |