Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi4g02026 | ATGTCGACCAACTGTGAAGGAAAGCTTACATGGCCGGAGCTTGTAGGGGCACAAGGATCAGCCGCATCAGCTACGATCGAAAGAGAGAATCCACGCGTTGATGCTATTGTGGTGGTGGAGGGAAGGGATGTGGTCATAACTGATTTCCGATGCGACCGAGTGTGGGTGTGGGTGAACCCTAGTGGGGTAGTCGTTCGAACTCCTTCCATTGGTTAA | 216 | 52.31 | MSTNCEGKLTWPELVGAQGSAASATIERENPRVDAIVVVEGRDVVITDFRCDRVWVWVNPSGVVVRTPSIG | 71 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi4g02026 | 71 | Pfam | Potato inhibitor I family | 8 | 71 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Dapi4g02026 | 71 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 4 | 71 | IPR036354 | - | |
| Dapi4g02026 | 71 | ProSitePatterns | Potato inhibitor I family signature. | 11 | 22 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Dapi4g02026 | 71 | Gene3D | Trypsin Inhibitor V, subunit A | 1 | 70 | - | - | |
| Dapi4g02026 | 71 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 4 | 71 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi4g02026 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260337 | Dapi20g01927 | Dapi4g02026 | |
| 264940 | Dapi4g02026 | Dapi20g01927 | |
| 385666 | Dapi20g01927 | Dapi4g02026 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr20:112779950 | Dapi4g02026 | Dapi-Chr4:122111217 | dispersed | |
| Dapi | Dapi-Chr4:122013762 | Dapi4g02026 | Dapi-Chr4:122111217 | dispersed | |
| Dapi | Dapi-Chr4:122108115 | Dapi4g02026 | Dapi-Chr4:122111217 | tandem |