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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi5g00111 ATGTCAGAAACCCTAACCACCACCACCACCAAACGCCACCGCGACCCCGCCGCCGATTCCCCACCGGAAACCCCAAAACGCCTTAGAAATTCCTATATTAATAATGAACAACAAGAAACCACCCAATATTTACTAGACTTCTTCACTTCTGAATCCGACCCGTTTCTTCATTTCGCCCCACAACCCGAACCCGACCCGGATAACAACTTGTCGGATAATGAGAAAGAGAGGGTTATTAGACACTTATTTGAAGCCTCCGACGACGAATTGGGGATTCCGAGCAGAGTGGATGACGTCATTGTAGGTGATGATGACGTCACCGGTGATGGTGATGGGTACTTTGGGGATTTTGGGTTGTGGGAGTTTGAAGATGAGGCTGCTAATTATTACACTTTGTTGCAGTCTGAGCTGTTTATGCAATAG 423 47.28 MSETLTTTTTKRHRDPAADSPPETPKRLRNSYINNEQQETTQYLLDFFTSESDPFLHFAPQPEPDPDNNLSDNEKERVIRHLFEASDDELGIPSRVDDVIVGDDDVTGDGDGYFGDFGLWEFEDEAANYYTLLQSELFMQ 140
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi5g00111 140 MobiDBLite consensus disorder prediction 8 22 - -
Dapi5g00111 140 PANTHER T6J4.11 PROTEIN 6 129 - -
Dapi5g00111 140 MobiDBLite consensus disorder prediction 55 75 - -
Dapi5g00111 140 MobiDBLite consensus disorder prediction 1 35 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi5g00111 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
254126 Dapi5g00111 Dapi21g00155
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr21:3183116 Dapi5g00111 Dapi-Chr5:2559428 wgd
Dapi Dapi-Chr21:131930179 Dapi5g00111 Dapi-Chr5:2559428 wgd
Dapi Dapi-Chr5:2559428 Dapi5g02049 Dapi-Chr5:118443733 wgd