AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi5g00118 ATGTGCGGAATAGCCCTAATTATCTCCGGTGTTCGTATCGATTTATCGTCTCTCCTTCCAGATCCAACCGATTATTCACCTCTTCCTCAGGATTCTGAAACTAGTTTATTTTCTGTAGATGATATCAAAGCAGGTTTGAGGAAAAGAGGTCCTGACAGTTTAGGAAGTAAGTCTATATTTGTTCGTGTTCATGAGGGACGAATTATTCGATATTCAGTGGAAGAAGAAGAAGAAGCAACCAAATTATTATCCAACTTACAAGATGAGTTTGATTTGAATAATGGTTTAGTTGGGAAGGTTTTGTTTCTTGGTGCTACATTGCAATTAAGAGGAGTATGTCCAATCACACAGCCTTTGGTGGACAAGTCTGGGAATATCCTTGTGTATAATGGTGAAGTGTTTGGAGGAATTGAGATCAGTAACTATAGCAATGACGGTGAAGTTCTCATTGAATCTTTGAGTAAATGTTGCAACTGCCTTTCTCAGGAACATGATGGCACATGTTCTCCTGGGAAATATTCTGTTCCTGAATTTCTTTCAAAAATCAAGGGGCCGTGGGCTTTAATCTACTGGCAGGAGAGCTCAAAAACAATATGGTTTGGTAGAGATGCACTTGGAAGGCGAAGCCTTCTTGTTCATTGGCCAAATGTAAAAGACTCCCGACTCATGCTTTCTTCTGTATCACCACCTTACACTGTTAATGAAAATTCTGATTTTGGATATGAAAATGTGCCTGGTGAACCAAGCTTTTGGGAAGAGCTTCCATGTGCAGTTTACAGCTTGTCCATGAATGCTTCAAACATCGATGGAAATCTGGTGTGTGAAGCCAAAAGACATAATTGGTTTGATCCCTTGCTGCAAGAATTGATTAAGTGGGATAGAACTCTTGTGGAACCCACACCTGATAATTTAATTGAAGTTCATAAAACGTATTCTAATGAGCAACAAGGGCATTTGCATCAGGAAGTTTTGGCTGCACTTAAAGAATCTGTGAGACGACGCACAGTATTTTCAGGAATTCACCTGGGCAAGTCTCCAGTGGCTGTTCTATTTTCTGGTGGATTAGATTCAATGATACTTGCTGCATTGCTGGATCAGTGCTTAGATCCAAAATATGAAATTGATCTGTTGAATGTGAGTTTTGATGGTCAGTTAGCTCCTGATAGAATTTCTGCCAGGGCAGGTGTGAATGAGCTCAGAAAAATTGCCACCTTGAGAAGATGGAATCTGGTAGAGATAGATGCAGAATTGTCAAAAATGACTAGAGAGACACAACATGTCATGTCACTTATTAATCCCTCGAATACATACATGGACCTTAATATTGGAATTGCATTGTGGTTGGCAGCTGGCGGTGATGGGCGGGTGAGTGAAGAAACTGGCGGGAATAATAATAATAACCATTCAGAATGCCAGCATGTTAAGTACAAGTCCGAATCCAGGATTTTATTGGTTGGTTCTGGGGCAGATGAGCAATGTGCTGGTTATGGCCGCCACAGAACTAAATACAGACAAAGCAGTTGGGCTGGGCTAAATGAAGAAATGAAATTAGATATGCAGAGAATATGGAAGAGAAACCTAGGTAGAGATGATAGATGCATTGCTGATAATGGCAGAGAGGCTAGATTTCCTTTTCTAGATGAGGATGTAATAAGGCTACTGCTCGATATTCCACTATGGGAAATTGCAGACCTTCGCCAACCCAGTGGAGTTGGAGATAAAAAAATATTGCGTGAGGTTGCAAGGATGCTTCGCTTGCAAGACGCAGCTGTTCTACCTAAAAGAGCTATTCAGTTTGGTTCAAGAATCGCCAGGGAATCAAACCGCAAGAATTTTGGAAGTAATCGAGCTGCAAATCAAGCTTCTGCTGGAAGTGCACTATTTCACCCGCTCTGA 1896 41.03 MCGIALIISGVRIDLSSLLPDPTDYSPLPQDSETSLFSVDDIKAGLRKRGPDSLGSKSIFVRVHEGRIIRYSVEEEEEATKLLSNLQDEFDLNNGLVGKVLFLGATLQLRGVCPITQPLVDKSGNILVYNGEVFGGIEISNYSNDGEVLIESLSKCCNCLSQEHDGTCSPGKYSVPEFLSKIKGPWALIYWQESSKTIWFGRDALGRRSLLVHWPNVKDSRLMLSSVSPPYTVNENSDFGYENVPGEPSFWEELPCAVYSLSMNASNIDGNLVCEAKRHNWFDPLLQELIKWDRTLVEPTPDNLIEVHKTYSNEQQGHLHQEVLAALKESVRRRTVFSGIHLGKSPVAVLFSGGLDSMILAALLDQCLDPKYEIDLLNVSFDGQLAPDRISARAGVNELRKIATLRRWNLVEIDAELSKMTRETQHVMSLINPSNTYMDLNIGIALWLAAGGDGRVSEETGGNNNNNHSECQHVKYKSESRILLVGSGADEQCAGYGRHRTKYRQSSWAGLNEEMKLDMQRIWKRNLGRDDRCIADNGREARFPFLDEDVIRLLLDIPLWEIADLRQPSGVGDKKILREVARMLRLQDAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSALFHPL 631
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi5g00118 631 CDD Asn-Synthase-B-C 325 600 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Dapi5g00118 631 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 628 IPR051857 -
Dapi5g00118 631 Pfam Glutamine amidotransferase domain 116 226 IPR017932 -
Dapi5g00118 631 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 28 238 IPR029055 -
Dapi5g00118 631 Pfam Asparagine synthase 506 584 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Dapi5g00118 631 Pfam Asparagine synthase 323 396 IPR001962 GO:0004066(InterPro)|GO:0006529(InterPro)
Dapi5g00118 631 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 46 227 IPR029055 -
Dapi5g00118 631 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 321 624 - -
Dapi5g00118 631 Gene3D HUPs 306 626 IPR014729 -
Dapi5g00118 631 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 254 IPR017932 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi5g00118 K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
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Event-related genes

Select Gene_1 Gene_2 Event_name
254131 Dapi5g00118 Dapi21g00162
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr3:35914646 Dapi5g00118 Dapi-Chr5:2688390 dispersed
Dapi Dapi-Chr3:35920321 Dapi5g00118 Dapi-Chr5:2688390 dispersed
Dapi Dapi-Chr21:3397758 Dapi5g00118 Dapi-Chr5:2688390 wgd