AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi5g00120 | ATGAGGAAACTCGGTGAAGCTCCGTATAAGAAGACGATGGATTGGTCAAAATGGTATATATTTTGGGCTGATGAACGTGTTATGGCCAAGAATCATGTTGATAGCAACTATAAGCTGGCCAAAGATCATCTTTTGTCGAAGTTACCTATTGTTCCTAGCCATGTACATTCCATCAATGATTCTCTCACTGCAGAAGAAGCCGCCAGCGAGTATGAGTTTGTCATTCGCCAGCTAGTCAAGACACGGGTGGTCAACGCTTCTGACATCAGCGACTTCCCGAAGTTTGACCTGATCCTTCTTGGGGTGGGCCCAGACGGCCATGTCGCGTCTCTATTCCCCAACCACCCGGTCCTTGAGGAAAATAACGAATGGGTGACCTTTATCACCAACTCCCCTAAACCACCGCCTGAAAGAATCACATTCACCTTGCCGGTAATCAACTCTGCCGCCAACGTGATGGTGGTGGCAACAGGCGGAGTGAAAGCAGAGCCTGTGCACTTGGCAATCGATGACATAGATCCCGAATGCCCGGTTTTGCCAGCTAGGATGGTTCAACCTAGTGTAGGGAAATTGGTATGGGTTTTAGATGTTGAGGCTGCCTCAAAGCTCACAATGGTTTCTTAG | 624 | 48.4 | MRKLGEAPYKKTMDWSKWYIFWADERVMAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAASEYEFVIRQLVKTRVVNASDISDFPKFDLILLGVGPDGHVASLFPNHPVLEENNEWVTFITNSPKPPPERITFTLPVINSAANVMVVATGGVKAEPVHLAIDDIDPECPVLPARMVQPSVGKLVWVLDVEAASKLTMVS | 207 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi5g00120 | 207 | CDD | 6PGL | 10 | 193 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Dapi5g00120 | 207 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 2 | 204 | IPR037171 | - | |
| Dapi5g00120 | 207 | Gene3D | - | 1 | 204 | - | - | |
| Dapi5g00120 | 207 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 3 | 193 | IPR006148 | GO:0005975(InterPro) | |
| Dapi5g00120 | 207 | NCBIfam | 6-phosphogluconolactonase | 10 | 203 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Dapi5g00120 | 207 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 1 | 204 | IPR039104 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi5g00120 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 76896 | Dapi18g02903 | Dapi5g00120 | |
| 79709 | Dapi24g00165 | Dapi5g00120 | |
| 81479 | Dapi2g03728 | Dapi5g00120 | |
| 82327 | Dapi5g00120 | Dapi8g00213 | |
| 82328 | Dapi5g00120 | Dapi8g00302 | |
| 254132 | Dapi5g00120 | Dapi21g00164 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr18:131247404 | Dapi5g00120 | Dapi-Chr5:2722713 | wgd | |
| Dapi | Dapi-Chr18:133521660 | Dapi5g00120 | Dapi-Chr5:2722713 | wgd | |
| Dapi | Dapi-Chr2:141306067 | Dapi5g00120 | Dapi-Chr5:2722713 | wgd | |
| Dapi | Dapi-Chr21:3441262 | Dapi5g00120 | Dapi-Chr5:2722713 | wgd | |
| Dapi | Dapi-Chr24:2299955 | Dapi5g00120 | Dapi-Chr5:2722713 | wgd | |
| Dapi | Dapi-Chr5:2722713 | Dapi8g00302 | Dapi-Chr8:5413081 | wgd | |
| Dapi | Dapi-Chr5:2722713 | Dapi8g00213 | Dapi-Chr8:3671496 | wgd |