Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00039 | ATGGCAAGTACTCATCATCAGGGTATCCACGGCAATCTACTTGAAATAACCGTTGTTAGCTGTTGTAAACTAAAGGACACGGAATGGATTTCACGGCAAGATCCTTACGTCGGTATCGAATACGGTAGCAGTAAATCGACCACTCGTACCTGTACAGATGGAGGCAAGAACCCTACGTTTCAAGAGAAGTTTGTTTTTACCCTTATTGAAGGATTGAGAGATCTCAATGTTTCGGTTTGGAATAGCAATACAGTTACACATGATGATTTTATCGGTGGTGGAAAGATTCCATTGGCAAAAGCTCTTTCTCAGGGATTTGATGATAGTAGCTGGCCGTTACAGAGTAATACTGGCAGGCACGCCGGAGAAGTCCGAATAATAATGCATTATACTAACGGAAATAAACCATCAAAAGATTCTGCTCAGAAACCATCAAAGGGTTTTACACCATCAGCACCGATGTCCATGTACCCTGCTGCACCCCCACCGGCTTACCCTCCACCAGGTGGGGCTTATCCTCCACCAGGTGGGGCTTATCCTCCACCCGGTGGTGCTTATCCTCCACCCTACGCAGCATATCCACATAATTCAGGTGGTTATCCACCGGCACCTTACCCACCTCAGCCGGTTACTTACCCTTCTCACCCGTATCCACCTAATCCAGCTTATGGATCACATTATCCCCCTGGTTCTCCATTCCCTGGAATGTATCCTCCTCCGCCGCCTTATTGA | 732 | 47.13 | MASTHHQGIHGNLLEITVVSCCKLKDTEWISRQDPYVGIEYGSSKSTTRTCTDGGKNPTFQEKFVFTLIEGLRDLNVSVWNSNTVTHDDFIGGGKIPLAKALSQGFDDSSWPLQSNTGRHAGEVRIIMHYTNGNKPSKDSAQKPSKGFTPSAPMSMYPAAPPPAYPPPGGAYPPPGGAYPPPGGAYPPPYAAYPHNSGGYPPAPYPPQPVTYPSHPYPPNPAYGSHYPPGSPFPGMYPPPPPY | 243 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00039 | 243 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 4 | 242 | IPR052981 | - | |
| Dapi7g00039 | 243 | SMART | C2-3c | 13 | 110 | IPR000008 | - | |
| Dapi7g00039 | 243 | MobiDBLite | consensus disorder prediction | 170 | 224 | - | - | |
| Dapi7g00039 | 243 | MobiDBLite | consensus disorder prediction | 133 | 149 | - | - | |
| Dapi7g00039 | 243 | MobiDBLite | consensus disorder prediction | 199 | 224 | - | - | |
| Dapi7g00039 | 243 | ProSiteProfiles | C2 domain profile. | 1 | 112 | IPR000008 | - | |
| Dapi7g00039 | 243 | MobiDBLite | consensus disorder prediction | 131 | 153 | - | - | |
| Dapi7g00039 | 243 | MobiDBLite | consensus disorder prediction | 170 | 189 | - | - | |
| Dapi7g00039 | 243 | Pfam | C2 domain | 13 | 104 | IPR000008 | - | |
| Dapi7g00039 | 243 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 10 | 132 | IPR035892 | - | |
| Dapi7g00039 | 243 | Gene3D | C2 domain | 12 | 132 | IPR035892 | - | |
| Dapi7g00039 | 243 | CDD | C2 | 14 | 111 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00039 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 73918 | Dapi12g01057 | Dapi7g00039 | |
| 76477 | Dapi18g00651 | Dapi7g00039 | |
| 80937 | Dapi28g00987 | Dapi7g00039 | |
| 81319 | Dapi2g00883 | Dapi7g00039 | |
| 251491 | Dapi7g00039 | Dapi23g00046 | |
| 386884 | Dapi23g00046 | Dapi7g00039 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr18:14974153 | Dapi7g00039 | Dapi-Chr7:895493 | wgd | |
| Dapi | Dapi-Chr2:20538846 | Dapi7g00039 | Dapi-Chr7:895493 | wgd | |
| Dapi | Dapi-Chr23:1392260 | Dapi7g00039 | Dapi-Chr7:895493 | wgd |