Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00057 | ATGGTACCCTCAAAACACATTCTTCCTGTAGCTAGACCAGACCCCGAAGTTGTTGCCATGCTTACGTCTGGACTTACAGCGTCGATTTCTCTAGAAAAGGCAGCACAAATGCAGTCTGGAGAGACGGTTCTTGTCACTGCTGCTGCCGGAGGGACTGGGCAATTTGCAGTTCAGCTTGCTAAATTAGCTGGAAACAAAGTGATAGCAACTTGTGGAGGTAAAGATAAGGCTATACTTCTAAGAGATTTGGGAGTTGATCGAGTCATCGACTATAAGGAAGAATCTATCAAAGACGTTCTTAAGAAGGAATTCCCAAAAGGCGTTGATATTGTTTATGAATCTGTTGGTGGTGATATGTTTGATACATGTTTCAATGCGTTAGCGGTTTATGGACGGATGGTGGTCATTGGAATGATTTCTCAGTATCAAGGAGAGCATGGATGGAAACCACGGAACTACACGGGATTATGCGAGAAACTCTTAGCAAAAAGTCAAACTGTGGCTGGTTTTTTTCTTTCGCAATATGATGATTTGTGGCAACAACATCTTGATAATCTGGTTCACCTTTTCTCTGTGGGAAAACTAAAGGTTGCAATAGACCCTAAAAGTTTTGTGGGCATTCAATCCGTTGTTAATGCAGTTGAATATCTCCATTCTGGTAAAAGTATTGGCAAGGTGGTTGTTTGCGTTGACCCGAGTTTCAGTCAACAAACAGCTAAGCTTTAA | 726 | 41.87 | MVPSKHILPVARPDPEVVAMLTSGLTASISLEKAAQMQSGETVLVTAAAGGTGQFAVQLAKLAGNKVIATCGGKDKAILLRDLGVDRVIDYKEESIKDVLKKEFPKGVDIVYESVGGDMFDTCFNALAVYGRMVVIGMISQYQGEHGWKPRNYTGLCEKLLAKSQTVAGFFLSQYDDLWQQHLDNLVHLFSVGKLKVAIDPKSFVGIQSVVNAVEYLHSGKSIGKVVVCVDPSFSQQTAKL | 241 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00057 | 241 | FunFam | Prostaglandin reductase 2 | 19 | 197 | - | - | |
| Dapi7g00057 | 241 | ProSitePatterns | Quinone oxidoreductase - zeta-crystallin signature. | 40 | 61 | IPR002364 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
| Dapi7g00057 | 241 | SMART | PKS-ER-names-mod | 1 | 228 | IPR020843 | GO:0016491(InterPro) | |
| Dapi7g00057 | 241 | Gene3D | - | 19 | 197 | - | - | |
| Dapi7g00057 | 241 | Gene3D | - | 13 | 228 | - | - | |
| Dapi7g00057 | 241 | Pfam | Zinc-binding dehydrogenase | 51 | 184 | IPR013149 | - | |
| Dapi7g00057 | 241 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 16 | 194 | IPR036291 | - | |
| Dapi7g00057 | 241 | ProSitePatterns | TonB-dependent receptor (TBDR) proteins signature 1. | 1 | 48 | IPR010916 | - | |
| Dapi7g00057 | 241 | PANTHER | SHORT-CHAIN DEHYDROGENASE-REDUCTASE | 1 | 232 | IPR051397 | GO:0005739(PANTHER)|GO:0016491(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00057 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:1690170 | Dapi7g00057 | Dapi-Chr7:1189611 | dispersed | |
| Dapi | Dapi-Chr7:1189611 | Dapi8g00833 | Dapi-Chr8:16581640 | dispersed | |
| Dapi | Dapi-Chr7:1168769 | Dapi7g00057 | Dapi-Chr7:1189611 | tandem |