AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00071 ATGGTTAAGGAAAACATAGACGATCTAGATATGGATCCAGCGGAAGCCCTAGCCGACGCAATCGAAACGCTAACTCTTCAAGGCGTAGATCTCTCCGGTATTGTTACCGATACACTCCCTGGAGAAACTAATATTGTGATTCAGTCACTTGATAGAATCAAACAGTTACAGTCCTCCGATTGGACTGATGAAGCCGTTGTTGATGAGGCGTTAGGTTTATTTGATACTTTAATTGCAATGTCTCGTGCCGAGGGATCTGGAAACGCTGCAATTGCTACGAGAAATGGAGGCGTTGAGTTGATGTGTTCTGTTTGCTCGAAACTTAGCACCTGTGGCCGTTATTCAGTACTTGTATTGGCTTTAGATGCATTGGCTGCATTTCTTCATGATCTTCAAAGTACAGAAACTTTTAGGCAAAGTGGAGGACCAAGAATGTTGATTGAGATCCTAACCAAAGAAACTCAAAATGTGAATATTTTGAACAGTGGGTTTTCTGTTGTGGCTGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCTTTTGTGGAATTACACATAGATGAATTAATGGTTGCAATTATGAAGAAATACACCAAAGGGAGCATTCCCAGTTTATATGATGCTATAAGAGTGCTTTTGGCTGCTGATGATAACCGTGTTGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAATTGGAATTGCCGAAGCTCTTGTGGAGGCATTGAATGATGGAATTAGCTCACCAAGTCTTGTATCAGCAACCATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGATCGGTTGCTGAAAATGGTGGTATAGATTCATTGCTCATTTGCATTGATGAATCTGGTGTGCAAGGGAATAACAATGTGGCTAAAGCTTGTTGCTCTTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCCATTGTTGATAGAGGAGGGTTGAATAGACTCATTACACTTTCTAGCAGACTTGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACTATCATATGCATCCTGTGCCTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATTCAATCGATGCAAAAGTTCCCTGACTCATATCAGCTGCAGAAAAATTCTTGCCTTATGATTCGTAATCTTGTTGCCAGGAATCCAGAAAACAGGCCTGTTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAAAGTCACAAAAGCTGTAGAGATGCAGCCATTGCTGCTCTTAGAGACTTGGGGCTTGAAAACTACAACTCTTAG 1335 41.35 MVKENIDDLDMDPAEALADAIETLTLQGVDLSGIVTDTLPGETNIVIQSLDRIKQLQSSDWTDEAVVDEALGLFDTLIAMSRAEGSGNAAIATRNGGVELMCSVCSKLSTCGRYSVLVLALDALAAFLHDLQSTETFRQSGGPRMLIEILTKETQNVNILNSGFSVVAAASTGNEVIKESFVELHIDELMVAIMKKYTKGSIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKIGIAEALVEALNDGISSPSLVSATIALKAVAVNDEICRSVAENGGIDSLLICIDESGVQGNNNVAKACCSLLSKLAGSDFNKSAIVDRGGLNRLITLSSRLADDPSVLQEVMTIICILCLRSPANASLAMEAGAGDLAIQSMQKFPDSYQLQKNSCLMIRNLVARNPENRPVLLSNGIEKIIRNAKESHKSCRDAAIAALRDLGLENYNS 444
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00071 444 SUPERFAMILY ARM repeat 94 438 IPR016024 -
Dapi7g00071 444 Gene3D - 41 223 IPR011989 -
Dapi7g00071 444 PANTHER UNCHARACTERIZED 2 438 - -
Dapi7g00071 444 SMART arm-5 267 311 IPR000225 GO:0005515(InterPro)
Dapi7g00071 444 SMART arm-5 356 398 IPR000225 GO:0005515(InterPro)
Dapi7g00071 444 SMART arm-5 312 354 IPR000225 GO:0005515(InterPro)
Dapi7g00071 444 SMART arm-5 400 439 IPR000225 GO:0005515(InterPro)
Dapi7g00071 444 Gene3D - 224 442 IPR011989 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00071 K24166 armadillo repeat-containing protein 6
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Event-related genes

Select Gene_1 Gene_2 Event_name
251514 Dapi7g00071 Dapi23g00090
386907 Dapi23g00090 Dapi7g00071
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:1984051 Dapi7g00071 Dapi-Chr7:1374372 wgd