Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00092 | ATGGCCACTGTGTGCCACCAGTTTCCGTCAGGGGAAATGGCGGCCGGTGACGGCGATGGGTTTGGTTCCGGTGAAGTGACGTCATCTTCCGGCGGTGAGGATTATGATCAAGATGGGTCTGATTTGGTAGCTTTGAAGATATGTGTGTTGGGTGATAATCAAATCGGCAAAACAAGCTTCTTGGCAAAGTATGTTGGGGAAGAAAAGATTAAGGAAGAATTAGAAGCTAAAAGAATAAATCACATGGATAAAACACTAAGCATTAGAGGAGCCAGAATTTCCTACAGCATCTGGGAAGTGAGTGGTGATGCATTATATCCAGATGGTGATTCAAGGACTCTGATTTCTTCAGCTTGTAAGGACTCCGTTGCTATATTTTTCATGTTTGACCTAACAAGTCGTCGTACCCTTTCTAGTGTTATCAATTGGCACCGACAAGCTAGGAATTATAATCAGACTGCAATTCCAATAATGGTTGGGAGCAAGTTTGACGAATATGTCCAGCTTCCGTTGGATTTACAATGGACGATTGCAAGTGAGGCGAGAGCATACGCGAAGGCCTTAAATGCGACCTTGTTCTTCTCTAGTGCATCTTACAATATTAACGTAAATAAAATTTTCAAGTTCGCGACTGCAAAGCTATTTGATTTGCCATGGACTTTGGAACGTAATCTTACGATCGGTGAGCCTATTATTGATTTCTAG | 705 | 42.41 | MATVCHQFPSGEMAAGDGDGFGSGEVTSSSGGEDYDQDGSDLVALKICVLGDNQIGKTSFLAKYVGEEKIKEELEAKRINHMDKTLSIRGARISYSIWEVSGDALYPDGDSRTLISSACKDSVAIFFMFDLTSRRTLSSVINWHRQARNYNQTAIPIMVGSKFDEYVQLPLDLQWTIASEARAYAKALNATLFFSSASYNINVNKIFKFATAKLFDLPWTLERNLTIGEPIIDF | 234 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00092 | 234 | Gene3D | - | 36 | 223 | IPR027417 | - | |
| Dapi7g00092 | 234 | PANTHER | - | 43 | 233 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Dapi7g00092 | 234 | SMART | rab-sub-5 | 45 | 217 | - | - | |
| Dapi7g00092 | 234 | ProSiteProfiles | small GTPase Rab1 family profile. | 34 | 234 | - | - | |
| Dapi7g00092 | 234 | Pfam | Ras family | 46 | 213 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Dapi7g00092 | 234 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 45 | 226 | IPR027417 | - | |
| Dapi7g00092 | 234 | PRINTS | Transforming protein P21 ras signature | 192 | 214 | - | - | |
| Dapi7g00092 | 234 | PRINTS | Transforming protein P21 ras signature | 45 | 66 | - | - | |
| Dapi7g00092 | 234 | PRINTS | Transforming protein P21 ras signature | 86 | 108 | - | - | |
| Dapi7g00092 | 234 | PRINTS | Transforming protein P21 ras signature | 152 | 165 | - | - | |
| Dapi7g00092 | 234 | FunFam | Septum-promoting GTP-binding protein 1 | 35 | 224 | - | - | |
| Dapi7g00092 | 234 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00092 | K07976 | Rab family, other |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251527 | Dapi7g00092 | Dapi23g00115 | |
| 386920 | Dapi23g00115 | Dapi7g00092 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr25:6015265 | Dapi7g00092 | Dapi-Chr7:1745399 | dispersed | |
| Dapi | Dapi-Chr7:1745399 | Dapi9g00281 | Dapi-Chr9:5114726 | dispersed | |
| Dapi | Dapi-Chr16:79177880 | Dapi7g00092 | Dapi-Chr7:1745399 | wgd | |
| Dapi | Dapi-Chr23:2407306 | Dapi7g00092 | Dapi-Chr7:1745399 | wgd |