AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00150 ATGGCTTCTTTTCCTTCTTCAAGTTGGAGCTTCATCTTCTATGCTCTGTTGCTCATACAAATTTGCGGTGCACGTGAAATCGTTGAAAAAAGCCCAAAAATCGACCACAACGACGAAAATCGTATAAGTATTTATGGGAAGAATGAAGTTCATGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTAAATGATTTATATTCGGGTAAAAAAATGCCAATTTATTTCGCGGTTAACGATCCTTCAACGACTCCTAGGTTGTTAACACGAGAACAATCCGACACGATACCATTTTCGTCTCAAAAACTCGGGTATCTTCTCGAGCTTATATCGTTAGCCGAGGGGTCGCCGCAAGCCCGAGCCATGGAACAAACACTTAAACAGTGTGAGCTTGAGGCCACCCCTGGTGAGACAAGGTTTTGTGCTAGCTCCTTAGAGTCAATGGTTGACTTGACACGTGGCATGTTGGGTGTGGTCAAACTGAAGGCGTTGACCACCAATATTCATAATTTGTCAAATACTATTTTGCAAGGGTATACCTTTTTGAAAGAGCCAATGGAGATTAATGTTTCTGATATGGTGGCTTGTCACACCATGGCTTATCCTTATGCTGTTTATTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATATAGTCGATGCTATTGCAGTTTGCCACATGGACACTTCCATGTGGGATAGTGATCACGTGGCGTTTCGTGTGCTCGGAGGCCAGCCTGGCAGCTCGCCGGTGTGCCATTTCCTCCCGGCCGATAATGTCGTGTGGATACCATCACCGTAG 834 43.76 MASFPSSSWSFIFYALLLIQICGAREIVEKSPKIDHNDENRISIYGKNEVHDLDPALNVFFHVNDLYSGKKMPIYFAVNDPSTTPRLLTREQSDTIPFSSQKLGYLLELISLAEGSPQARAMEQTLKQCELEATPGETRFCASSLESMVDLTRGMLGVVKLKALTTNIHNLSNTILQGYTFLKEPMEINVSDMVACHTMAYPYAVYYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSMWDSDHVAFRVLGGQPGSSPVCHFLPADNVVWIPSP 277
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00150 277 SMART BURP-2 58 276 IPR004873 -
Dapi7g00150 277 Pfam BURP domain 59 274 IPR004873 -
Dapi7g00150 277 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 46 276 IPR044816 -
Dapi7g00150 277 ProSiteProfiles BURP domain profile. 60 276 IPR004873 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00150 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
73953 Dapi12g01196 Dapi7g00150
80949 Dapi28g01125 Dapi7g00150
251559 Dapi7g00150 Dapi23g00167
386952 Dapi23g00167 Dapi7g00150
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:3611890 Dapi7g00150 Dapi-Chr7:3137737 dispersed
Dapi Dapi-Chr23:3667807 Dapi7g00150 Dapi-Chr7:3137737 dispersed
Dapi Dapi-Chr28:86661592 Dapi7g00150 Dapi-Chr7:3137737 dispersed
Dapi Dapi-Chr7:3137737 Dapi8g02103 Dapi-Chr8:98726908 dispersed
Dapi Dapi-Chr7:3048073 Dapi7g00150 Dapi-Chr7:3137737 proximal