AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00158 ATGGAGCTCCGGTCAATTCAGTCGCCGGTTATCAGTAGCATACCTACGAAAGGCTCCATCGAAAACCGCCAACTCATCAGCTCGATCGGTACTACGAAGAGAATCGCTCGATCCAATGCGATTAAGTTTAAACCTGTTCGATTCAACGTTCAAGCGTCAGGTGCAACAACAGTTGGTGTACAGCCTGGTGAAACGAAGACAAAAGACGGTGAGAAAGATGAAAATCTCATATTTGTTGCAGGAGCAACCGGCAAAGTTGGTTCACGAACAGTAAGGGAGCTTTTGAAGCTAGGGTTTAATGTTCGAGCTGGTGTACGAAGTACTCAAAGAGCAGAATCCTTGGTGAAGAGCGTGCAGCAGTTGAAGCTTGATGACGCATTATCAGGTGGAAGTCAGCCTATAGAGAAGCTTCAACTTGTGGAGTGTGATTTGGAGAAACCAGAGCAAATTAAGGCCGCGTTGGGCAATTCTTCAACAGTTATATGTTGCATTGGGGCCAGTGAGAAGGAAATATTTGATGTTACTGGGCCCTATCGAATTGACTTTCAAGCCACCAAAAACCTTATTGATGCAGCTGCTGCTGCAAAAGCAAAGCACTTTATTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTATTGAATTTGTTTTGGGGCGTCCTATGTTGGAAAAGGAAAGCTGAAGAAGCACTGCTTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGAGGCATGGAACGTCCTACTGATTCCTTCAAGGAAACACATAATCTTACCCTCTCTCCAGGAGATACTTTATTTGGTGGTCTAGTTTCAAATTTACAGGTGGCAGAACTCCTTGCGTTTATGGCTAAAAACCCCAATCTTTCATATTGTAAAGTAGTGGAAGTGGTTGCGGAAACAACAGCACCATTGACCCCCATGGGCGACCTGCTAACAAAAATTCCACCTCAACGCGCCATACCTTACCAACCTAAGGAACCTGAAGCTATCAAAGAACCCGAACCTGTTTCTAAAAGCACCATATCTGAGAGTTCTAGCATTGCCACTGAAACACAATCTCTGTCAAAAACTGCTTCCACACAACCGCTTTCCCCATATACTGCCTATGAAGGTTTGAAACCCCCTACATCCCCAACTCCATTGCCACCTGACGGCAGTAAGGCGGTGGTTGAAGCAGTATCAGCTCCTTCTACTGATCCTGAAACCATCACAAAATTGGAAACAGTTACTATTACAACTGAACCTGCACCAGTGGCTGTAGGATTGCAGAAAACCAGACCTCTCTCTCCTTATACTGCTTATGAAAATCTGAAGCCTCCTACTTCACCATGTCCAAGTACCCCATCGGTATCACCACCACCAACTTCCCTTGTAGACAACGGGTCTCCTATTGCTTCCACACCCGAAGACACCTCCGTTCACTCAACAGTGAAACCTAGGCCACTTTCACCGTACCCCATGTATGAAAACTTGAAGCCTCCAAGTTCTCCTACTCCTTCCGCTCCTTAA 1527 45.51 MELRSIQSPVISSIPTKGSIENRQLISSIGTTKRIARSNAIKFKPVRFNVQASGATTVGVQPGETKTKDGEKDENLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQLKLDDALSGGSQPIEKLQLVECDLEKPEQIKAALGNSSTVICCIGASEKEIFDVTGPYRIDFQATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLSPGDTLFGGLVSNLQVAELLAFMAKNPNLSYCKVVEVVAETTAPLTPMGDLLTKIPPQRAIPYQPKEPEAIKEPEPVSKSTISESSSIATETQSLSKTASTQPLSPYTAYEGLKPPTSPTPLPPDGSKAVVEAVSAPSTDPETITKLETVTITTEPAPVAVGLQKTRPLSPYTAYENLKPPTSPCPSTPSVSPPPTSLVDNGSPIASTPEDTSVHSTVKPRPLSPYPMYENLKPPSSPTPSAP 508
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00158 508 CDD SDR-a5 77 306 - -
Dapi7g00158 508 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 457 IPR044719 -
Dapi7g00158 508 MobiDBLite consensus disorder prediction 331 393 - -
Dapi7g00158 508 MobiDBLite consensus disorder prediction 459 484 - -
Dapi7g00158 508 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 76 304 IPR036291 -
Dapi7g00158 508 MobiDBLite consensus disorder prediction 492 508 - -
Dapi7g00158 508 FunFam Protein TIC 62, chloroplastic 73 323 - -
Dapi7g00158 508 MobiDBLite consensus disorder prediction 437 508 - -
Dapi7g00158 508 MobiDBLite consensus disorder prediction 343 372 - -
Dapi7g00158 508 Pfam NAD(P)H-binding 81 292 IPR016040 -
Dapi7g00158 508 Gene3D - 73 320 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00158 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251564 Dapi7g00158 Dapi23g00174
386957 Dapi23g00174 Dapi7g00158
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr4:118631334 Dapi7g00158 Dapi-Chr7:3229169 dispersed
Dapi Dapi-Chr23:3739152 Dapi7g00158 Dapi-Chr7:3229169 wgd