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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00161 ATGAAATACAATAATATCTCCCATTTTAGCCACCCGCAACACCGGCTCAAACCGGGCTACACCGAGGTCCCGTTCAAGTGCGACGGTTGCAAGGAAGTCGGTATAGGGTCCAACTATAAATGCACAACATGCAACTATGATTTACATGTCCATTGTGCCCTCCCTACTCCTTCCATTACTCATCCTTTCTATACCAAGTGTTCATTCCAATTCCTATCGCGCCCTCCCGGCCCCATAGCCCGCTATTGCAATGCGTGCGAGAAAGTTGTCTCAGGGTTTGTTTACCATTGCAAGTTGTGCGGGTTTGACCTTCACCCGTGTTGTGCCAAGCTTCCAACTATGTTGGACGATGGTGACGTGGAGTTGTACTTGTATCGAAAAGTAGGGTCCGCCTGCCACAGGTGTGGCAGGAAAGGACGAAGTTGGAGTTACAGGTCAAAGTGCAAGAAGTACAACCTGCATGTGGCATGTGTGAAAGAGATGTTGGTGGAGAGTTGGCATGAGATATACTTTGGTAGGAGTGGTGGGGTGAGTGGTGAATATTACCATGATTTGTGTGGGCAAAATGGGAAATATGAGAAAAGAATTCCAAGCTTGAAGGGTACATTGGAAAGCTATCATCATCACCATAATCACCATCAAAGCAAAGGGAAAGTGAAGAAATGTTGTGAGATGGCTAGTTTGGCAATGCAGTTTGTGATTTCGGCTGTTCTCGGTGATCCGACCACGCTAATCGCGGGTGTTGTTGGTGCTTTGATGTCTAAATAG 768 46.88 MKYNNISHFSHPQHRLKPGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPTPSITHPFYTKCSFQFLSRPPGPIARYCNACEKVVSGFVYHCKLCGFDLHPCCAKLPTMLDDGDVELYLYRKVGSACHRCGRKGRSWSYRSKCKKYNLHVACVKEMLVESWHEIYFGRSGGVSGEYYHDLCGQNGKYEKRIPSLKGTLESYHHHHNHHQSKGKVKKCCEMASLAMQFVISAVLGDPTTLIAGVVGALMSK 255
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00161 255 Gene3D - 12 58 - -
Dapi7g00161 255 Pfam C1 domain 74 109 IPR004146 -
Dapi7g00161 255 Pfam C1 domain 9 53 IPR004146 -
Dapi7g00161 255 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Dapi7g00161 255 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 253 - -
Dapi7g00161 255 SUPERFAMILY Cysteine-rich domain 30 114 IPR046349 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00161 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251567 Dapi7g00161 Dapi23g00177
386960 Dapi23g00177 Dapi7g00161
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr18:16750174 Dapi7g00161 Dapi-Chr7:3264228 wgd
Dapi Dapi-Chr2:18634231 Dapi7g00161 Dapi-Chr7:3264228 wgd
Dapi Dapi-Chr23:3758559 Dapi7g00161 Dapi-Chr7:3264228 wgd