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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00179 ATGGACGAGGTTATTACCATGGCCGACGTGGCGTACCACGCTAGCAAGGCGGCGGAAACGCCGTCGTCTCCGGCTCAGGTTCTTCCGTACAGTGTTCCGTTATTATCAGCATTCCTTGCATTTGCCATTGCTCAATTTCTCAAGGTTATAACCACCTGGTATAAAGAAAAGAGATGGGATCCGAAAAAGATTGTGGGCTCAGGTGGAATGCCATCATCTCATTCTTCAACTGTTGTGGCACTTGCAGTATCTGTTGGTCTACATGATGGAGTTGAATCATCATCATTTGCAATTGCAGTTGTTATGGCTTTTATTGTTATGTATGATGCATCTGGAGTCAGACTCCATGCCGGTCGCCAGGCTGAAGTGTTGAACCAGATTGTCTGTGAATTTCCTCCCGAGCACCCGTTATCGACAGCCAGACCTCTACGTGATTCTCTTGGGCATACTCCATTACAGGTGATTGCAGGGGCCATGTTAGGATTCATAGTGGCATTTATGATGAAAGCATCTGAGTAG 519 46.82 MDEVITMADVAYHASKAAETPSSPAQVLPYSVPLLSAFLAFAIAQFLKVITTWYKEKRWDPKKIVGSGGMPSSHSSTVVALAVSVGLHDGVESSSFAIAVVMAFIVMYDASGVRLHAGRQAEVLNQIVCEFPPEHPLSTARPLRDSLGHTPLQVIAGAMLGFIVAFMMKASE 172
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00179 172 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 12 170 IPR003832 -
Dapi7g00179 172 CDD PAP2-like 34 166 - -
Dapi7g00179 172 Pfam Divergent PAP2 family 33 164 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00179 K09775 uncharacterized protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
251579 Dapi7g00179 Dapi23g00202
386972 Dapi23g00202 Dapi7g00179
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr24:19334167 Dapi7g00179 Dapi-Chr7:3573913 dispersed
Dapi Dapi-Chr25:5629959 Dapi7g00179 Dapi-Chr7:3573913 dispersed
Dapi Dapi-Chr5:893349 Dapi7g00179 Dapi-Chr7:3573913 dispersed
Dapi Dapi-Chr7:3573913 Dapi8g01116 Dapi-Chr8:23777041 dispersed
Dapi Dapi-Chr23:4122714 Dapi7g00179 Dapi-Chr7:3573913 wgd