AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00189 ATGAAACTACAACAACTAAACCAACAGGAACGTGACATCTGTCGCACCATCGAAGTCGTTCAAACGGCAACTAACAAACTAACCGTCGCTTCCGATAAGTTCGATTCCAATGGCGAGGAGCTTTACACGCCTCCTCTCAATTTCTCCATGGTCGATAATGGCATATTCCGTTCCGGATTCCCTGATACTGCTAATTTCTCGTTTCTTAAAACCCTAGGCCTGCGTTCGATTGTATATTTGTGTCCTGAACCGTATCCGGAGCATAATATGGAGTTTTTGAAGGCGAATCGGATTCATTTGTTTCAGTTTGGAATCGAAGGAACGAAGGAACCTTTCGTTAATATCCCCGAAGATACGATTCGTGAAGCATTAAAAGTTGTTCTTGATGTAAGAAATCACCCCTTGTTAATTCATTGCAAAAGAGGCAAGCATCGAACGGGTTGTCTAGTGGGATGTTTGAGAAAGATACAAAGATGGTGTTTAACTTCAATTTTTGATGAGTACCAAAGATTTGCAGCTGCAAAAGCTAGGCTTTCAGATCAAAGGTTTATTGAGCTTTTTGATGCATCTGGATTTAAAGATATACCACCATGTCCATGTTCTTGTTCTAGGAAGTAA 618 40.78 MKLQQLNQQERDICRTIEVVQTATNKLTVASDKFDSNGEELYTPPLNFSMVDNGIFRSGFPDTANFSFLKTLGLRSIVYLCPEPYPEHNMEFLKANRIHLFQFGIEGTKEPFVNIPEDTIREALKVVLDVRNHPLLIHCKRGKHRTGCLVGCLRKIQRWCLTSIFDEYQRFAAAKARLSDQRFIELFDASGFKDIPPCPCSCSRK 205
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00189 205 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311(InterPro)
Dapi7g00189 205 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 42 188 IPR029021 -
Dapi7g00189 205 Gene3D Protein tyrosine phosphatase superfamily 42 191 IPR029021 -
Dapi7g00189 205 ProSiteProfiles Dual specificity protein phosphatase domain profile. 47 198 IPR020422 GO:0006470(InterPro)
Dapi7g00189 205 Pfam Tyrosine phosphatase family 44 193 IPR004861 -
Dapi7g00189 205 PANTHER TYROSINE-PROTEIN PHOSPHATASE 33 195 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Dapi7g00189 205 FunFam probable tyrosine-protein phosphatase At1g05000 41 191 - -
Dapi7g00189 205 CDD PFA-DSP-Siw14 41 188 - -
Dapi7g00189 205 PRINTS Plant and fungal dual specificity phosphatase signature 79 92 IPR020428 GO:0016791(InterPro)
Dapi7g00189 205 PRINTS Plant and fungal dual specificity phosphatase signature 115 129 IPR020428 GO:0016791(InterPro)
Dapi7g00189 205 PRINTS Plant and fungal dual specificity phosphatase signature 98 112 IPR020428 GO:0016791(InterPro)
Dapi7g00189 205 PRINTS Plant and fungal dual specificity phosphatase signature 42 59 IPR020428 GO:0016791(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00189 K18045 tyrosine-protein phosphatase SIW14 [EC:3.1.3.48]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251582 Dapi7g00189 Dapi23g00211
381671 Dapi16g01974 Dapi7g00189
386975 Dapi23g00211 Dapi7g00189
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr3:96751903 Dapi7g00189 Dapi-Chr7:3993996 dispersed
Dapi Dapi-Chr12:94117508 Dapi7g00189 Dapi-Chr7:3993996 wgd
Dapi Dapi-Chr16:76533415 Dapi7g00189 Dapi-Chr7:3993996 wgd
Dapi Dapi-Chr23:4563381 Dapi7g00189 Dapi-Chr7:3993996 wgd
leaf

Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Dapi26g00497 DST 72 462 Protein tyrosine phosphatase (PTP) family AT3G55270 55.584 6.33e-162 483.0
Dapi19g02283 . 101 199 Protein tyrosine phosphatase (PTP) family AT5G16480 70.707 2.89e-46 148.0
Dapi7g02323 ACH 18 315 Protein tyrosine phosphatase (PTP) family AT2G35680 52.159 2.15e-101 298.0
Dapi18g00274 . 806 1281 Protein tyrosine phosphatase (PTP) family AT5G58160 63.299 0.0 575.0
Dapi18g00809 DST 1 257 Protein tyrosine phosphatase (PTP) family AT2G04550 59.259 1.89e-106 307.0
Dapi19g00911 DST,WGDA 62 590 Protein tyrosine phosphatase (PTP) family AT3G01510 73.07 0.0 805.0
Dapi30g01730 ACH,DST 1 378 Protein tyrosine phosphatase (PTP) family AT3G52180 58.27 3.30e-157 446.0
Dapi28g00986 ACH,DST 7 611 Protein tyrosine phosphatase (PTP) family AT3G19420 65.63 0.0 803.0
Dapi2g01478 . 165 210 Protein tyrosine phosphatase (PTP) family AT3G52180 65.217 1.10e-13 64.3
Dapi2g00709 DST 1 257 Protein tyrosine phosphatase (PTP) family AT2G04550 59.124 4.62e-107 309.0
Dapi18g02194 ACH,DST 1 781 Protein tyrosine phosphatase (PTP) family AT3G55270 51.016 0.0 760.0
Dapi18g02329 ACH,DST,WGDA 6 840 Protein tyrosine phosphatase (PTP) family AT3G10550 64.83 0.0 1109.0
Dapi3g02216 . 6 199 Protein tyrosine phosphatase (PTP) family AT5G16480 61.307 8.36e-84 246.0
Dapi25g01219 DST 19 307 Protein tyrosine phosphatase (PTP) family AT2G35320 56.507 1.60e-121 348.0
Dapi12g01056 ACH,DST 7 611 Protein tyrosine phosphatase (PTP) family AT3G19420 65.63 0.0 803.0
Dapi12g01271 ACH 38 201 Protein tyrosine phosphatase (PTP) family AT1G05000 65.854 1.09e-76 227.0
Dapi12g01737 DST,WGDA 451 549 Protein tyrosine phosphatase (PTP) family AT3G01510 31.683 2.05e-07 52.0
Dapi1g01809 DST 459 536 Protein tyrosine phosphatase (PTP) family AT3G01510 36.709 9.94e-07 49.3
Dapi31g00334 ACH 1 274 Protein tyrosine phosphatase (PTP) family AT3G55270 56.631 8.89e-94 292.0
Dapi21g00878 DST,WGDA 458 534 Protein tyrosine phosphatase (PTP) family AT3G01510 33.766 2.06e-06 47.0
Dapi29g00207 DST,WGDA 14 912 Protein tyrosine phosphatase (PTP) family AT5G23720 62.596 0.0 1102.0
Dapi30g02279 DST 5 191 Protein tyrosine phosphatase (PTP) family AT3G02800 58.031 2.14e-81 239.0
Dapi5g02039 . 446 536 Protein tyrosine phosphatase (PTP) family AT3G01510 28.571 3.01e-06 47.4
Dapi2g03981 DST 458 538 Protein tyrosine phosphatase (PTP) family AT3G01510 34.568 5.66e-07 49.7
Dapi3g00691 DST,WGDA 62 590 Protein tyrosine phosphatase (PTP) family AT3G01510 72.881 0.0 801.0
Dapi3g00264 ACH,DST,WGDA 18 840 Protein tyrosine phosphatase (PTP) family AT3G10550 54.296 0.0 872.0
Dapi3g00256 ACH 1 372 Protein tyrosine phosphatase (PTP) family AT3G52180 60.963 5.78e-159 449.0
Dapi16g01974 DST,WGDA 47 215 Protein tyrosine phosphatase (PTP) family AT1G05000 76.471 4.75e-97 278.0
Dapi16g02101 ACH 27 611 Protein tyrosine phosphatase (PTP) family AT3G19420 65.47 0.0 788.0
Dapi4g02528 DST,WGDA 49 186 Protein tyrosine phosphatase (PTP) family AT3G23610 35.374 4.46e-19 82.8
Dapi1g02656 DST 1 396 Protein tyrosine phosphatase (PTP) family AT5G58160 55.779 9.63e-156 487.0
Dapi1g02657 DST 1103 1259 Protein tyrosine phosphatase (PTP) family AT5G58160 56.875 1.56e-52 177.0
Dapi1g02830 WGDA 34 226 Protein tyrosine phosphatase (PTP) family AT5G56610 69.5 1.74e-100 291.0
Dapi15g01191 DST 2 335 Protein tyrosine phosphatase (PTP) family AT1G71860 61.243 3.02e-144 420.0
Dapi15g01190 DST 36 335 Protein tyrosine phosphatase (PTP) family AT1G71860 52.695 5.66e-118 343.0
Dapi31g01606 DST 2 339 Protein tyrosine phosphatase (PTP) family AT1G71860 61.111 5.18e-149 422.0
Dapi31g01605 . 36 335 Protein tyrosine phosphatase (PTP) family AT1G71860 52.994 1.19e-118 344.0
Dapi6g01099 DST,WGDA 11 912 Protein tyrosine phosphatase (PTP) family AT5G23720 63.337 0.0 1122.0
Dapi32g00033 ACH,DST 35 198 Protein tyrosine phosphatase (PTP) family AT2G35680 46.341 3.70e-48 155.0
Dapi6g00881 DST 1 257 Protein tyrosine phosphatase (PTP) family AT2G04550 59.353 1.13e-107 310.0
Dapi6g00296 . 29 189 Protein tyrosine phosphatase (PTP) family AT3G23610 62.112 1.71e-71 212.0
Dapi27g00283 . 1 657 Protein tyrosine phosphatase (PTP) family AT5G01290 52.507 0.0 678.0
Dapi14g02290 DST 5 195 Protein tyrosine phosphatase (PTP) family AT3G02800 56.853 4.56e-80 236.0
Dapi5g00880 DST 458 534 Protein tyrosine phosphatase (PTP) family AT3G01510 33.766 2.06e-06 47.0
Dapi25g02566 DST 76 159 Protein tyrosine phosphatase (PTP) family AT3G01510 27.381 3.91e-06 46.6
Dapi7g01564 DST,WGDA 60 653 Protein tyrosine phosphatase (PTP) family AT5G01290 67.055 0.0 830.0
Dapi12g02379 DST 1 337 Protein tyrosine phosphatase (PTP) family AT2G35680 52.035 7.47e-110 320.0
Dapi18g03359 DST 458 535 Protein tyrosine phosphatase (PTP) family AT3G01510 34.615 1.40e-06 48.5
Dapi18g03302 . 67 212 Protein tyrosine phosphatase (PTP) family AT3G55270 43.151 5.97e-37 137.0
Dapi26g01427 DST 58 611 Protein tyrosine phosphatase (PTP) family AT3G19420 59.858 0.0 692.0
Dapi23g00211 ACH,DST,WGDA 17 207 Protein tyrosine phosphatase (PTP) family AT1G05000 72.251 3.10e-99 285.0
Dapi1g00735 DST,WGDA 265 326 Protein tyrosine phosphatase (PTP) family AT3G52180 40.625 5.31e-07 50.1
Dapi20g00433 DST,WGDA 9 239 Protein tyrosine phosphatase (PTP) family AT3G44620 63.519 3.77e-100 290.0
Dapi22g01816 DST 23 395 Protein tyrosine phosphatase (PTP) family AT5G39400 56.952 5.06e-155 442.0
Dapi2g00283 . 1 399 Protein tyrosine phosphatase (PTP) family AT5G58160 63.21 0.0 568.0
Dapi9g01230 DST 19 307 Protein tyrosine phosphatase (PTP) family AT2G35320 55.29 4.17e-120 345.0
Dapi14g01766 ACH,DST 1 378 Protein tyrosine phosphatase (PTP) family AT3G52180 57.761 2.75e-154 438.0
Dapi4g00459 DST,WGDA 9 239 Protein tyrosine phosphatase (PTP) family AT3G44620 62.083 1.10e-98 286.0
Dapi24g00506 ACH,DST,WGDA 10 840 Protein tyrosine phosphatase (PTP) family AT3G10550 60.585 0.0 1011.0
Dapi10g00517 DST 72 477 Protein tyrosine phosphatase (PTP) family AT3G55270 54.034 1.30e-159 477.0
Dapi21g01630 WGDA 457 542 Protein tyrosine phosphatase (PTP) family AT3G01510 32.967 2.75e-06 45.4
Dapi20g02434 DST,WGDA 66 186 Protein tyrosine phosphatase (PTP) family AT3G23610 38.017 6.77e-18 79.7
Dapi16g01357 DST,WGDA 60 653 Protein tyrosine phosphatase (PTP) family AT5G01290 67.899 0.0 826.0
Dapi16g00035 ACH,DST 35 198 Protein tyrosine phosphatase (PTP) family AT2G35680 66.463 5.81e-82 243.0
Dapi8g00675 ACH,DST,WGDA 10 840 Protein tyrosine phosphatase (PTP) family AT3G10550 64.486 0.0 1109.0
Dapi7g00189 DST,WGDA 17 207 Protein tyrosine phosphatase (PTP) family AT1G05000 72.775 6.47e-100 286.0
Dapi28g01434 DST,WGDA 451 549 Protein tyrosine phosphatase (PTP) family AT3G01510 31.683 2.63e-07 51.2
Dapi17g03327 DST 1160 1308 Protein tyrosine phosphatase (PTP) family AT5G58160 57.047 7.52e-46 159.0
Dapi17g03325 DST 72 396 Protein tyrosine phosphatase (PTP) family AT5G58160 45.566 1.40e-81 283.0
Dapi30g00604 . 1 79 Protein tyrosine phosphatase (PTP) family AT2G35680 51.22 2.92e-19 78.2
Dapi28g02123 DST 1 337 Protein tyrosine phosphatase (PTP) family AT2G35680 52.326 5.16e-111 323.0
Dapi3g00253 ACH,DST,WGDA 1 372 Protein tyrosine phosphatase (PTP) family AT3G52180 60.963 5.78e-159 449.0
Dapi12g00078 ACH,WGDA 34 207 Protein tyrosine phosphatase (PTP) family AT5G56610 76.437 1.59e-100 292.0
Dapi9g02864 DST 76 159 Protein tyrosine phosphatase (PTP) family AT3G01510 27.381 4.88e-06 46.2
Dapi22g00326 . 29 189 Protein tyrosine phosphatase (PTP) family AT3G23610 62.112 2.18e-71 212.0
Dapi22g00534 DST 1 257 Protein tyrosine phosphatase (PTP) family AT2G04550 59.353 8.69e-108 311.0
Dapi10g01414 DST 58 611 Protein tyrosine phosphatase (PTP) family AT3G19420 59.646 0.0 691.0
Dapi6g01825 DST 23 396 Protein tyrosine phosphatase (PTP) family AT5G39400 57.6 8.98e-158 449.0
Dapi32g01330 DST,WGDA 1 653 Protein tyrosine phosphatase (PTP) family AT5G01290 63.319 0.0 840.0
Dapi32g01310 . 1 396 Protein tyrosine phosphatase (PTP) family AT5G58160 55.779 1.21e-154 489.0
Dapi2g03085 ACH,DST 1 781 Protein tyrosine phosphatase (PTP) family AT3G55270 51.196 0.0 757.0
Dapi2g03237 ACH,DST,WGDA 6 840 Protein tyrosine phosphatase (PTP) family AT3G10550 64.947 0.0 1111.0
Dapi22g01136 DST,WGDA 11 912 Protein tyrosine phosphatase (PTP) family AT5G23720 63.326 0.0 1123.0
Dapi23g01474 DST,WGDA 60 653 Protein tyrosine phosphatase (PTP) family AT5G01290 67.055 0.0 830.0
Dapi19g00514 ACH,DST,WGDA 18 840 Protein tyrosine phosphatase (PTP) family AT3G10550 62.0 0.0 1070.0
Dapi19g00506 DST,WGDA 1 372 Protein tyrosine phosphatase (PTP) family AT3G52180 60.428 5.56e-157 444.0
Dapi19g00221 . 23 282 Protein tyrosine phosphatase (PTP) family AT3G10940 73.485 4.69e-145 406.0
Dapi17g02391 DST 459 536 Protein tyrosine phosphatase (PTP) family AT3G01510 36.709 9.94e-07 49.3
Dapi17g00759 DST,WGDA 265 326 Protein tyrosine phosphatase (PTP) family AT3G52180 40.625 5.46e-07 49.7
Dapi13g00201 DST,WGDA 14 912 Protein tyrosine phosphatase (PTP) family AT5G23720 62.596 0.0 1102.0