Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00237 | ATGGCGGAAGCTTCCAGAATCTTCCACACCACACTACTGCCTACATTATACCAAACCTCATCTCTCAGAAAACGTTCATCTCAAACTATATCCCTACGAAGAACCTCACCGGCGACCGTTCGCTGCACGATCTCCACTAGCAGCAGTGACACATCTAGGGCTTACGTGGCTCCTCAGCCGATACCGTGGGGCTGCGAAATCGATTCTGTCGAGAACGCAGCTGCGTTGCAGAAATGGTTGACGGATTCCGGTTTGCCGCCTCAGAAAATGGATATACAGAAGGTTGATGTTGGAGAGAGAGGTCTCGTTGCCAATAATAATATTAGGAAGGGAGAGAAATTGCTATTTGTACCTCCGTCGCTTGTTATTTCGGCAGATTCGGAGTGGAGTTTTCCAGAAGCTGGGGAAGTTTTGAAGAGATATAATGTACCCGATTGGCCATTAATTGCAACCTACCTAATTAGTGAAGCAAGCCTTATGAAGTCATCTAGATGGAGCAGTTATATATCAGCCTTACCAACACAGCCTTACTCACTTTTATACTGGACGCGTGCAGAATTAGATCAGTACTTGGAAGCATCCCAGATTAGGGAACGCGCAATCGAAAGGATCAATAATGTAACCGGAACATACAATGACTTGAGAGCAAGAATTTTCTCCAAGCACCCTAATTTATTTCCTGAAGAGATATTTAATATGGAAACATTTAAATGGTCATTTGGCATTCTTTTTTCGCGTTTGGTTCGGTTACCCTCATTGGATGGAAGGGTTGCCTTAGTCCCTTGGGCAGATATGCTGAACCATAGTTGTGATGTGGAAACCTTTTTGGATTATGATAAATCGACAAAAGGAGTTGTATTTACAACCGACCGCCCTTACCTGCCAGGTGAGCAGGTGTTTATTTCATACGGCAGGAAATCTAATGGAGAACTGTTGCTTTCTTATGGGTTTGTGCCAAGGCAAGGGACAAACCCGCGTGACTCAGTTGAGTTGCCAATGATGCTTAAAAAATCAGATAAATGCTATGAACAGAAGGTGGAAGCTTTGAAGAAGCATGGGTTGTCAGCATCACAATGTTTTCCTTTACAAGTTACGGGTTGGCCATTGGAGCTAATAGCATATGCGTATTTAGCTGTCAGTCCCCCTAGTATGAGTGGAAAGTTTGAAGAGATGGCTTCCGCAGCATCAAATAAAAACACCAGCAAAAAGGAAATCAGGTATCCTGAATTAGAGGATCAGGCATTGCAGTTTATCTTGGATAGCTGTGAATCCAGCATATCAAAGTATACCAAGTTCCTTCAGGCAAGTGGGTCAATGGATTTGGATATAACATCTCCAAAGCAGTTGAACCGTAAAGTATTCCTCAAACAGTTAGCTGTGGACTTGTGCAATAGTGAACAGCGAATTCTATTTCGTGCCCAATACATATTGAGGAGAAAGTTAAGGGATATGAGGAGAGGTGAACTGAAGGCCCTAAAATTGTTTGATAGTGTCACAAAGTTCTTCAAATAA | 1512 | 42.99 | MAEASRIFHTTLLPTLYQTSSLRKRSSQTISLRRTSPATVRCTISTSSSDTSRAYVAPQPIPWGCEIDSVENAAALQKWLTDSGLPPQKMDIQKVDVGERGLVANNNIRKGEKLLFVPPSLVISADSEWSFPEAGEVLKRYNVPDWPLIATYLISEASLMKSSRWSSYISALPTQPYSLLYWTRAELDQYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEIFNMETFKWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRPYLPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPMMLKKSDKCYEQKVEALKKHGLSASQCFPLQVTGWPLELIAYAYLAVSPPSMSGKFEEMASAASNKNTSKKEIRYPELEDQALQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRKLRDMRRGELKALKLFDSVTKFFK | 503 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00237 | 503 | Pfam | SET domain | 100 | 304 | IPR001214 | GO:0005515(InterPro) | |
| Dapi7g00237 | 503 | CDD | SET-RBCMT | 87 | 318 | IPR044431 | GO:0016279(InterPro)|GO:0018022(InterPro) | |
| Dapi7g00237 | 503 | FunFam | Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic | 57 | 317 | - | - | |
| Dapi7g00237 | 503 | Pfam | Rubisco LSMT substrate-binding | 337 | 470 | IPR015353 | - | |
| Dapi7g00237 | 503 | SUPERFAMILY | RuBisCo LSMT C-terminal, substrate-binding domain | 334 | 502 | IPR036464 | - | |
| Dapi7g00237 | 503 | SMART | set-7 | 88 | 310 | IPR001214 | GO:0005515(InterPro) | |
| Dapi7g00237 | 503 | SUPERFAMILY | SET domain | 72 | 320 | IPR046341 | - | |
| Dapi7g00237 | 503 | ProSiteProfiles | SET domain profile. | 88 | 304 | IPR001214 | GO:0005515(InterPro) | |
| Dapi7g00237 | 503 | Coils | Coil | 197 | 217 | - | - | |
| Dapi7g00237 | 503 | Gene3D | - | 322 | 492 | IPR036464 | - | |
| Dapi7g00237 | 503 | PANTHER | UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE | 73 | 478 | IPR050600 | GO:0016279(PANTHER)|GO:0018026(PANTHER) | |
| Dapi7g00237 | 503 | Gene3D | set domain protein methyltransferase, domain 1 | 46 | 317 | - | - | |
| Dapi7g00237 | 503 | FunFam | Rubisco methyltransferase family protein | 323 | 486 | - | - | |
| Dapi7g00237 | 503 | PIRSF | RMT-SET | 1 | 500 | IPR011192 | GO:0009507(InterPro)|GO:0030785(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00237 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251613 | Dapi7g00237 | Dapi23g00257 | |
| 387006 | Dapi23g00257 | Dapi7g00237 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr3:20452522 | Dapi7g00237 | Dapi-Chr7:4730496 | dispersed | |
| Dapi | Dapi-Chr23:5292737 | Dapi7g00237 | Dapi-Chr7:4730496 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Dapi | SET | 1.7e-16 | No_clan | TR | SET |