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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00272 ATGGCTACAAACCTTGTTCACGGCGTCAACCACTACCATTACCACCGCCACCAGATCTCACGGCACCAATGTTTTACTTTCCGCCATAGACGGACCTCCGTTAACGTCAATTCGGTAACTTCATATCTGAAACATCCAATTATTACGCTGCCAAGGCAAATTAGGGTTCCAAGATATCCAATTATTCGTAGATTCAGTAAAATATCTGCTTCGCTTGATCTAACCGAAGACAATGTCAAGCTGGTTTTAGATGACGCTAGATCAAAGTTTTCTCACATATTCGATACATCAGTTGGAATGACAGGAGTTGCAGAATTAGCTGAAGTTGATGGACCGTTTGTGAAGATTAGACTCAAGGGTCGATTCTGGCATGAACGATCGTTGGTATTAGCTAGGCTTGGGAATTATTTAAAGGAAAGGATCCCTGAGATATTGGAAGTGGATATTGAAGATGAGAAGCAATTGGATGACAGTCCTGAAAACTTTTGA 489 41.51 MATNLVHGVNHYHYHRHQISRHQCFTFRHRRTSVNVNSVTSYLKHPIITLPRQIRVPRYPIIRRFSKISASLDLTEDNVKLVLDDARSKFSHIFDTSVGMTGVAELAEVDGPFVKIRLKGRFWHERSLVLARLGNYLKERIPEILEVDIEDEKQLDDSPENF 162
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00272 162 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 102 148 IPR034904 -
Dapi7g00272 162 PANTHER OS09G0481800 PROTEIN 49 162 - -
Dapi7g00272 162 Gene3D - 71 149 IPR034904 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00272 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251630 Dapi7g00272 Dapi23g00298
387023 Dapi23g00298 Dapi7g00272
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:6139188 Dapi7g00272 Dapi-Chr7:5526494 wgd