AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00275 ATGAGGGAAGAAGGAATCAGCTCGTCCGGAGACCCCTTACTTTTCCCTAATTCACCTCCTCCCACCGCTGCTGCCAGCTCTGCTGGAGCATCATCACCTGCTGTTGCCACCAATGCTGGCAGTACAGATTGGTTGGGTCATGGTCAGGGGTCGAAAGCGGGTTCAATGCCGCGCGTTAGTTCGCAGCCTATGTGGATATCGTTGAGTGCAAGTGCTGGTGGTTCGGCTCTTGGTTCGTCCAAACCTTCATGTAGACCATGGGAAAGGGGTGATCTTTTAAGACGGTTGTCTACGTTCAGTCCTGCAAATTGGTTTGGGAAACCAAAGGCTGCTAGTTCACTTTCTTGCGCTAGGAGAGGTTGGGTGAATGTGGATGCTGATAAGATTCAATGTGAGTCTTGTGGGGAAAACCTGAAATATAATGGGCAAGATTCATGGGCTCGTACAGAAGGTGAAAATGGTGAAGAATTTGCTAACCTGCTGGATGAAGGACATAATGCCACCTGTCCTTGGAGAGGAAACAGTTGTGCTGAAAGCTTGGTTCAATTTCCTCCTACTCCACCGTCTGCTCTGATTGGTGGTTACAAGGACCGTTGTGATGGACTGATTCAGTTTCCTTATTTACCTGTTGTGGCTAATTCGGCTATTGATCAGATGAAGCTTTCTAGAGGTCTAGAAATTGACCGATTTCTAGTCCAATCATCTGCTTATCCAGGAGATGTTATGTCTGATTCGGAAATAAGCATATATATACGTGCCCAGAAGTTGATAAGCCTATGTGGATGGGAGCCTAGGTGGCTTCGAAATGTTCAGGATTGTGAAGAGCATTCTGCTCAATCAGCTAGAAATGGGGGTTCGTTCAGTCCTATTAAAGATAATGACCCGTTACAAGATCGAGGCCCGAACAAGAAACGTGCCACTAATTCAACCAGAAAAGGTTCTCGGGTCAGGTCAAAATTTGAATCTGGATCGCTGCTGTTGGATTGTAGCTTATGTGGCGCCGCAGTGAGGATCTTGGACTTTGTTCGGGTCAACCTTCCTGCTCGTCTTGCTCCTAACAACATCGATGTTCCCGAAACGAGTAAAAAGATGGCGATTACTCGTGGAGTGAGTGCCGCTAGTGCCATTAGCGGGTGGGTTGCTGCTGACGGGGCGGAAGAAGAGCAGACAGAGGGCGTTGATGAAGCTGCAATATCAAATGTCAGGATGGATTTAAATCTTACAATGGGAAGTGGGTTTTCTACGGGGCATGGGCTTAAAAGACCGATATCTGAATTATATCAAGATGGGAATTTAGGTCGGGATCTAGTCATCGGGCAGCCAGCTGGCAGTGAGGTTGGTGATCGTGCAGCATCATATGAATCCCGAGGTCCTACTACTTTCAAAAGGAATGTTGATGAAGGTGGGTCCACTGTTGATAGACCACAGGAGCTGATTCGCCAGGCGGATAGTGTTGAGGGTGTTGTCATTGACCGTGATGGTGATGAAATCAATGACAGCAAGACGTCTACCGCCCCATCGAAACGAGCCTGTGAGTCATCATCTGGTGCAGGTCCTAGTCAGACTTTGTATTTTGATATTGGCCAGGCTGGTCCATCAAGCCAAGGCCATGAACATGCAGCACGTGCTTCTTCTGTTATTGCAATGGATACAATTTGTCATAGTGAAGATAATGATTCTATGGAAAGCGTAGAAAACCATCCGGGTTATAACGATGAGGTCAACTTCCCGTCCACGTCAGCGGTCAACCCTGATCTGAATGAAACTTCAGACATGAACCATAGTATCCAGGCTCAACAAAGCACGTGCCCTCCTGCGGTTTGGGTCAACAGTGAAATAGGTGTTAGCAGCACTAATTATGAAGAAGTAGTGAATACAGAAATCGCCATGGTTTACAGGCGGGATGGCCCTAGCTTGGCTGTTAGTGGCGGTAGTGTTGGAATGGCTGCGAGTCATGAAGCTGAGATTCATGGTTTGATTCATAGGACAGAAAGTGTTGTTGGTGACATGGAACCAGTTACTGGTGTGACTGAGAACCAAGGTCAAACTGGTGAATTTATTCCTGAAGAAATGCAACAAGAATATTCTGGAAGGGGGGATAGTGGGTCGAAGGTTGTTGGTTCAGTTAAAGGTGAATCTGTTGAGAGTGGTGAGAAGACTAGTGATTTGAATCTTTTACCACATGAACAAAACTCTCACCCTTCTCTTTCTTGCAACGCGGTTGTATATTCGGGCCTTGAAGTATCAAAAGATGAAGTGATGCAGGCCCGCAAGTCATCCCCTAATGAAGAATGTGGGTACCCAAGTTATCCACCTGCAAATGAATTAGGGCCTCCAAATGGAGAAAGCAAGTTTGAAGAACCTCTGGGGTTATCAACAGTAATAACGGTGCTAGTTCAAGTTCTAGTGCCTTAG 2415 46.71 MREEGISSSGDPLLFPNSPPPTAAASSAGASSPAVATNAGSTDWLGHGQGSKAGSMPRVSSQPMWISLSASAGGSALGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCARRGWVNVDADKIQCESCGENLKYNGQDSWARTEGENGEEFANLLDEGHNATCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLIQFPYLPVVANSAIDQMKLSRGLEIDRFLVQSSAYPGDVMSDSEISIYIRAQKLISLCGWEPRWLRNVQDCEEHSAQSARNGGSFSPIKDNDPLQDRGPNKKRATNSTRKGSRVRSKFESGSLLLDCSLCGAAVRILDFVRVNLPARLAPNNIDVPETSKKMAITRGVSAASAISGWVAADGAEEEQTEGVDEAAISNVRMDLNLTMGSGFSTGHGLKRPISELYQDGNLGRDLVIGQPAGSEVGDRAASYESRGPTTFKRNVDEGGSTVDRPQELIRQADSVEGVVIDRDGDEINDSKTSTAPSKRACESSSGAGPSQTLYFDIGQAGPSSQGHEHAARASSVIAMDTICHSEDNDSMESVENHPGYNDEVNFPSTSAVNPDLNETSDMNHSIQAQQSTCPPAVWVNSEIGVSSTNYEEVVNTEIAMVYRRDGPSLAVSGGSVGMAASHEAEIHGLIHRTESVVGDMEPVTGVTENQGQTGEFIPEEMQQEYSGRGDSGSKVVGSVKGESVESGEKTSDLNLLPHEQNSHPSLSCNAVVYSGLEVSKDEVMQARKSSPNEECGYPSYPPANELGPPNGESKFEEPLGLSTVITVLVQVLVP 804
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00275 804 MobiDBLite consensus disorder prediction 278 315 - -
Dapi7g00275 804 MobiDBLite consensus disorder prediction 493 542 - -
Dapi7g00275 804 MobiDBLite consensus disorder prediction 695 720 - -
Dapi7g00275 804 MobiDBLite consensus disorder prediction 1 59 - -
Dapi7g00275 804 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 729 - GO:0005634(PANTHER)
Dapi7g00275 804 Pfam C3HC zinc finger-like 86 206 IPR012935 GO:0008270(InterPro)
Dapi7g00275 804 MobiDBLite consensus disorder prediction 443 471 - -
Dapi7g00275 804 MobiDBLite consensus disorder prediction 20 45 - -
Dapi7g00275 804 MobiDBLite consensus disorder prediction 500 529 - -
Dapi7g00275 804 MobiDBLite consensus disorder prediction 757 785 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00275 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
74061 Dapi12g01332 Dapi7g00275
251633 Dapi7g00275 Dapi23g00301
387026 Dapi23g00301 Dapi7g00275
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr6:24743480 Dapi7g00275 Dapi-Chr7:5534101 dispersed
Dapi Dapi-Chr12:95480586 Dapi7g00275 Dapi-Chr7:5534101 wgd
Dapi Dapi-Chr23:6152062 Dapi7g00275 Dapi-Chr7:5534101 wgd