Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00295 | ATGTCCTCTTCACTTGTTCCACTCACCTCCACATTCGCTTCCACCAACACCCAACGAGCCTTCAAGACTCGAACCAAGCAAGCCCAAGGGCTTAGAGTCTCATGCAACAGTGCGCCAGATAATAATCATAATGACAAGAAACTCATACTCCCCAATGTAGACCGGAGGAACCTGCTGGTGGGACTTGGCGGTCTCTACACCGCAGCCAACCTGCCAGGGGCAATCGCGGCTCCCATTACCGCTCCCGATATCACGTCCATATGCAAGGAAGCCAATTCAGGCATTAGCAACCCTGATGCCGCTATCAGGACAAGAAAATGCTGCCCTCCTGACCTTGGGAAGCCGGTTATAGATTTTGTTTTTCCCACAGAAAAGACGGTGAGGAAAAGATGGCCGGCGCATAAGGGGACACAGAAGCAGATGGACGATTATAGAAGAGCCATCGCAGCCATGAGAGCTCTCAAAGATGATGACCCGCACAGCTTCGTCAGCCAAGCTAAAATCCATTGTGCTTACTGCAACGGAGGTTACACTCAAGTCGCTAGCGGTTTCCCTGAAATCGATATTCAGATTCACAACTCATGGCTCTTCTTTCCTTTCCACCGCTGGTACCTTTACTTCTACGAGAGAATACTCGGAAAGTTGATTGACGAGCCCGATTTCGCCCTACCTTTCTGGAAATGGGACGAACCAGCTGGAATGCCGATTCCAGATATCTTTTTGCCCGGTGCACCAAACCCCCTGTATGACCAATACAGGGATCCCAATCATGTCCAGGATAGATTGGTGGATCTGGACTACGATGGTAAAGATAAGGACATTCCAGATCAGCAACAGATACTCTGCAATCTGAGTACAGTCTACCGAGACTTGGTCAGAAACGGAGGTGACACACTAAGCTTCTTCGGGGGCAAATACGTAGCTGGAGATCAACCTGTAGCCAATGGTGCGAAGTCAGTGGGATCCGTGGAAGCCGGTTCTCACACCGCGGTACACAGATGGGTAGGTGACCCAAACCAACCTAACAACGAGGACATGGGTAACTTCTACTCCGCAGGGTATGATCCTATATTCTACATCCACCATGCAAATGTGGACCGTATGTGGAAGCTATGGAAGGATCTGAAACTTCCGGGGCATGTAGATCCAACCGACTCAGACTGGTTAGACGCCTCATTTGTGTTCTATGATGAGAACAAGAATCTTGTGCGTGTCTACAACAGAGACTCCGTCAACCTAGACAAACTCAACTACAAGTACATTGAGAACTCCAAGGAAGTGTTCCCATGGCGCAACAGTCGACCCGCTCGACGTAGAAAGAGCTCCCAGGTTGCTTCGACTACAGGAGACGTGAAAACGGTGGACAAAACCAAGTTCCCGGTGAAACTAGACAAAATATTCAAGGTGTAA | 1410 | 49.43 | MSSSLVPLTSTFASTNTQRAFKTRTKQAQGLRVSCNSAPDNNHNDKKLILPNVDRRNLLVGLGGLYTAANLPGAIAAPITAPDITSICKEANSGISNPDAAIRTRKCCPPDLGKPVIDFVFPTEKTVRKRWPAHKGTQKQMDDYRRAIAAMRALKDDDPHSFVSQAKIHCAYCNGGYTQVASGFPEIDIQIHNSWLFFPFHRWYLYFYERILGKLIDEPDFALPFWKWDEPAGMPIPDIFLPGAPNPLYDQYRDPNHVQDRLVDLDYDGKDKDIPDQQQILCNLSTVYRDLVRNGGDTLSFFGGKYVAGDQPVANGAKSVGSVEAGSHTAVHRWVGDPNQPNNEDMGNFYSAGYDPIFYIHHANVDRMWKLWKDLKLPGHVDPTDSDWLDASFVFYDENKNLVRVYNRDSVNLDKLNYKYIENSKEVFPWRNSRPARRRKSSQVASTTGDVKTVDKTKFPVKLDKIFKV | 469 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00295 | 469 | PRINTS | Tyrosinase copper-binding domain signature | 327 | 338 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | PRINTS | Tyrosinase copper-binding domain signature | 354 | 372 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | PRINTS | Tyrosinase copper-binding domain signature | 192 | 209 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | PRINTS | Tyrosinase copper-binding domain signature | 223 | 228 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | PANTHER | TYROSINASE FAMILY MEMBER | 53 | 445 | IPR050316 | - | |
| Dapi7g00295 | 469 | Pfam | Polyphenol oxidase middle domain | 382 | 435 | IPR022739 | GO:0004097(InterPro) | |
| Dapi7g00295 | 469 | Gene3D | - | 77 | 426 | IPR008922 | - | |
| Dapi7g00295 | 469 | Pfam | Common central domain of tyrosinase | 160 | 374 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 355 | 366 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 192 | 209 | IPR002227 | GO:0016491(InterPro) | |
| Dapi7g00295 | 469 | SUPERFAMILY | Di-copper centre-containing domain | 102 | 420 | IPR008922 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00295 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:6772055 | Dapi7g00295 | Dapi-Chr7:6075231 | dispersed | |
| Dapi | Dapi-Chr23:6808002 | Dapi7g00295 | Dapi-Chr7:6075231 | dispersed | |
| Dapi | Dapi-Chr7:6075231 | Dapi7g00797 | Dapi-Chr7:19335614 | dispersed | |
| Dapi | Dapi-Chr7:6023311 | Dapi7g00295 | Dapi-Chr7:6075231 | tandem | |
| Dapi | Dapi-Chr7:6075231 | Dapi7g00296 | Dapi-Chr7:6128074 | tandem |