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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00302 ATGGCTGCTATCAATGATCAAGATGGTTTTGACAATCTTGAAACCTTGGAAATCGATGACACCCTTTTGATGTCAATACTCGATGAACCACATGTTGAAAACGATTGTGACGACGAGAGGTTGTCGAGTGTAATCCGTTCTTTAGAAGCTGAGATTAATCCAATTGTAATTGATGATCGTGACATGAGTTTGGAACTTGAATGGAACACAGACTGGGAAGGTAGTTACCAGTATTCAATCAGTCAAAACTATTCAAAATCGCTAGAGTCAAAATCGCAAGACGTTGAATATAGTTGGATGGATATGGATGATATGTACATCCAAGGGTATGAAGACATAATAGAGTTTGCCGGTGTTAAAGATTATTCTCAAATTTCTTATGGAAATAACATTGAGGAGCATGGTTACGGTGCTTTATGGCAAGAAATTAATTGA 435 37.24 MAAINDQDGFDNLETLEIDDTLLMSILDEPHVENDCDDERLSSVIRSLEAEINPIVIDDRDMSLELEWNTDWEGSYQYSISQNYSKSLESKSQDVEYSWMDMDDMYIQGYEDIIEFAGVKDYSQISYGNNIEEHGYGALWQEIN 144
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00302 144 PANTHER VIRUS-SPECIFIC-SIGNALING-PATHWAY REGULATED PROTEIN-RELATED 2 142 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00302 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251646 Dapi7g00302 Dapi23g00333
381627 Dapi16g01854 Dapi7g00302
387039 Dapi23g00333 Dapi7g00302
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:68063022 Dapi7g00302 Dapi-Chr7:6350779 wgd
Dapi Dapi-Chr23:7026101 Dapi7g00302 Dapi-Chr7:6350779 wgd
Dapi Dapi-Chr32:78070319 Dapi7g00302 Dapi-Chr7:6350779 wgd