AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00356 | ATGGCTTCTTCTTCTTATTCAACTTTCCTCATATTCTTCCTCTCCTTTCAACTACTCTCCTCCATTTCACAAGCCGTAGTGCCCGCTTCACAAACATTCACTTACATCAACCAAGGTGAGTTCGGCGACTACGTCGTCGAGTACGATGCAAATTACCGAACTCTCCCCCCTTTCAACAACCCCTTCCAACTCTGCTTCTACAACACAACCCCTAACGCATACACTCTAGCCCTCCGCATGGGCACCGTTCGCTCCGAATCCCTAATGCGTTGGGTTTGGGAGGCTAACCGCGGAAACCCCGTCCGCGAAAACGCCACACTCACATTCGGGACAGACGGAAACCTAGTCCTCGCGGACGCCGACGGACGCGTTGTCTGGCAAACGAACACCGCTAACAAGGGCGTTGTCGGGTTTCAAGTCCTCCCAACCGGTAACATTGTCCTTCACGACGGGAAGGGTAGTTTCGTATGGCAAAGCTTTGATTCCCCGACAGATACTCTCTTGGTCGGTCAAACGCTTCGAGCGGGAGCTCCGAATAAGCTCGCGAGTCGGGTTTCCGAGGCGAGTAATGTTGATGGGCCGTATAGTTTGGTGATGGAGCCGAAAGGGTTAGCGTTGTATTACAAAAGCCCCAATTCGCCTCGACCGATGCTTTACTGGTCGTCTCGCGAATGGTTTACTGTTGATAAGGGTAGTTTGGTCAATTTAACTCTTACGTCGGTCCCGGATACCGACGAGGGGTTTCTATATTACTTAACGTTCGATTATTACACCACGACGTCGTCTTCGAACCGCAACATGGCGTTTTCGCGTTACAACAACATGTTATCGTATCTTCGGTTAGGGATAGACGGGAACCTAAGATTCTACACGTATAACCCGAACGTACAAGGTGTAGCGTGGGAGTTGGTGTACACGTTTCTCGATCGGGATTCGATGGAAGGCGAGTGTCAGTTGCCGGGGCGGTGTGGGAGCTTTGGGTTGTGTGAGGACAGTCAGTGTGTGGCGTGCCCGACACCAAACGGGTTAAGTGGTTGGAGCAAAGATTGCGAGGCGAAAAAGGTGACGTCATGCAAGGCTAGTGAGTTTGGGTACTACAAGCTTGAAGGGGTTGATCATTTTATGATAAAGTACACTCGGGGAGATGGGGCGACGAAACAAAGCGATTGCGAGAGTAAATGCACGAAGGATTGTAAATGCGAGGGGTATTTCTATCACACGGTTGATTCGAGGTGTTGGATTGCTTACGATTTGAAAACATTGACGAGAGTCGGGAACTCGACTCATTTGGCGTATATTAAAACACCCAACAAGTAG | 1317 | 50.19 | MASSSYSTFLIFFLSFQLLSSISQAVVPASQTFTYINQGEFGDYVVEYDANYRTLPPFNNPFQLCFYNTTPNAYTLALRMGTVRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNIVLHDGKGSFVWQSFDSPTDTLLVGQTLRAGAPNKLASRVSEASNVDGPYSLVMEPKGLALYYKSPNSPRPMLYWSSREWFTVDKGSLVNLTLTSVPDTDEGFLYYLTFDYYTTTSSSNRNMAFSRYNNMLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGSFGLCEDSQCVACPTPNGLSGWSKDCEAKKVTSCKASEFGYYKLEGVDHFMIKYTRGDGATKQSDCESKCTKDCKCEGYFYHTVDSRCWIAYDLKTLTRVGNSTHLAYIKTPNK | 438 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00356 | 438 | PIRSF | SLG | 1 | 438 | IPR035446 | - | |
| Dapi7g00356 | 438 | Gene3D | - | 58 | 162 | IPR036426 | - | |
| Dapi7g00356 | 438 | CDD | B-lectin | 46 | 163 | IPR001480 | - | |
| Dapi7g00356 | 438 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 44 | 436 | IPR051343 | - | |
| Dapi7g00356 | 438 | FunFam | Os04g0303100 protein | 82 | 216 | - | - | |
| Dapi7g00356 | 438 | Pfam | D-mannose binding lectin | 92 | 175 | IPR001480 | - | |
| Dapi7g00356 | 438 | Pfam | S-locus glycoprotein domain | 231 | 342 | IPR000858 | GO:0048544(InterPro) | |
| Dapi7g00356 | 438 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 71 | 221 | IPR036426 | - | |
| Dapi7g00356 | 438 | CDD | PAN-AP-plant | 357 | 436 | - | - | |
| Dapi7g00356 | 438 | SMART | blect-4 | 46 | 163 | IPR001480 | - | |
| Dapi7g00356 | 438 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 161 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00356 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251674 | Dapi7g00356 | Dapi23g00376 | |
| 387067 | Dapi23g00376 | Dapi7g00356 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:8331416 | Dapi7g00356 | Dapi-Chr7:7645235 | dispersed | |
| Dapi | Dapi-Chr7:6483515 | Dapi7g00356 | Dapi-Chr7:7645235 | dispersed | |
| Dapi | Dapi-Chr7:6514413 | Dapi7g00356 | Dapi-Chr7:7645235 | dispersed | |
| Dapi | Dapi-Chr7:7427803 | Dapi7g00356 | Dapi-Chr7:7645235 | dispersed | |
| Dapi | Dapi-Chr7:7509622 | Dapi7g00356 | Dapi-Chr7:7645235 | dispersed | |
| Dapi | Dapi-Chr7:7610982 | Dapi7g00356 | Dapi-Chr7:7645235 | tandem |