AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00357 | ATGACAAACAAACTCACTCTCATCATTCCATCTTCCTTCCATATACTCAGGATTTGGGGGAAAATTGAAGGAGCGTTTTTGAGGCTTTTGGTTCCTGGAAAGGTTTCTGAGGATGATAAGCTTATTGAGTATGATGCGTTGTTGTTGGATAAGTTTCTAGATATTCTTCAGGATTTACATGGAGAGGATCTCAAGGAAACGGTTCAAGAATGTTATGAGCTTTCTGCTGAATATGAAGGAAAGCGTGACCCGAAGAAGCTGGAGGAGCTAGGAAGTGTGTTGACAAGTTTAGATCCCGGGGATTCGATTGTCATTGCAAAAGCTTTCTCTCACATGCTTAATTTAGCCAATCTGGCTGAAGAGGTTCAGATTGCTTATCGCCGAAGAATCAAACTGAAAAAGGGTGATTTTGCTGATGAGGCTAATGCAACGACTGAATCGGATATTGAAGAAACTCTTAAGAAGCTTGTGTATAAGCTTAACAAGTCTCCTGAAGAGGTTTTTGATGCACTCAAAAACCAAACTGTTGACTTGGTCTTGACTGCTCATCCGACTCAATCGGTCCGCAGATCTCTACTTCAGAAGCATGGAAGGATCCGGAACTGTCTGGCCCAGTTATATGCTAAAGACATCACTCCTGATGACAAACAGGAACTGGATGAGGCCTTGCATCGAGAAATCCAAGCTGCTTTCCGTACTGATGAGATCAGAAGGACCCAACCAACCCCACAAGATGAAATGAGAGCTGGAATGAGTTACTTTCATGAAACAATATGGAAGGGTGTTCCTAAATTCTTACGTCGTGTTGACACTGCTTTAAAGAATATTGGGATTAACGAGCGTGTTCCTTATAATGCGCCTCTTATTCAGTTTTCTTCATGGATGGGTGGTGACCGTGATGGCAATCCGAGGGTAACTCCTGAGGTAACAAGGGATGTTTGCTTACTAGCAAGAATGATGGCTGCAAACATGTACTTTTCCCAGATAGAGGATCTAATGTTTGAGATGTCCATGTGGCGTTGTACTGATGAACTTCGTGATCGAGCAGAAGAACTCTTCAGAACAGCTAGAAGAGATGTGAAGCACTACATAGAGTTCTGGAAACAAGTTCCTCCCACTGAACCTTACCGTGTAATTCTTGGTGATGTAAGGGATAAATTATATAATACACGTGAACGTTCTCGCCACTTGTTAGCCCATGATATATCCGACATTCCAGAAGAGGCGGTTTACACCAATGTTGAACAGTTCCTGGAACCTCTGGAGCTATGCTACAGATCACTATGCGCGTGTGGTGACCGTGTGATTGCTGATGGAAGCCTTCTAGATTTTCTTAGACAGGTGTCAACATTCGGATTGTCGCTAGTGAAACTTGATATAAGACAAGAATCTGATCGCCACACAGACGTCCTTGATGCCATCACTCAACATCTGGAAATTGGGTCCTACCGTGATTGGCCTGAAGAAAAACGCCAAGATTGGCTTCTAGCTGAACTCAGCGGAAAACGTCCTCTTTTCGGTTCAGATCTTCCAAAAACCGAGGAAATTAAGGATGTTTTGGACACGTTTGGTGTTTTAGCCGAACTACCATCTGATTGTTTTGGTGCTTACATCATCTCAATGGCCACATCACCTTCTGATGTCCTTGCTGTCGAGCTTCTTCAACGTGAATGCCATGTAAAACAACCGTTACGCGTGGTCCCACTTTTTGAAAAACTTGCTGACTTGGAGGCTGCCCCTGCCGCCATGGCCCGCCTTTTCTCAGTCGATTGGTACAAAAACCGGATTAACGGTAAACAAGAAGTCATGATCGGGTACTCTGATTCAGGAAAAGATGCAGGCCGGTTTTCTGCTGCCTGGCAGCTTTACAAAGCTCAAGAAGAGCTTAAAAATGTCGCAAAGGAATTTGGGGTTAAACTTGTCATGTTTCACGGGCGTGGTGGGACTGTTGGTAGAGGTGGTGGACCCACCCATTTGGCTATCCTGTCCCAACCAGCTGAGACTATTCAAGGCTCATTAAGAGTCACGGTTCAGGGTGAGGTCATTGAGCAGTCTTTTGGTGAGGAACATTTGTGTTTTAGAACACTTCAAAGGTTTTGTGCAGCTACACTTGAGCACGGAATGAACCCGCCAATCTCACCAAGGCCCGAGTGGCGTGAACTTATGGATCAGATGGCGATTGTTGCAACTGAACAGTATCGTTCTATCGTGTTCAAGGAACCACGTTTTGTCGAATATTTCCGCCTTGCCACACCAGAACTGGAGTACGGGCGTATGAATATCGGAAGTCGGCCATCAAAAAGAAAACCGAGTGGCGGTATAGAATCACTTCGAGCCATTCCATGGATCTTTGCATGGACCCAAACTAGGTTCCATCTCCCAGTTTGGCTCGGGTTTGGGGCTGCATTCAAACAAGTCATTCAAAAGGACAGCAAGAATCTTAAAATGCTTCAAGAGATGTACAAAACGTGGCCTTTCTTTCGGGTCACCATTGATTTAGTCGAAATGGTGTTTGCTAAAGGAGACCCGGGCATTGCAGCCCTGAATGACAAGCTCCTTGTTTCTGAAGATTTATGGTCCTTTGGAGAATCATTAAGAGCAAACTATGAAGAAACCAAAGATTATCTCCTCAAGATTGCTGGACACAAAGACCTACTCGAGGGTGATCCCTACTTGAAACAAAGACTTAAGTTGCGTGATTCATACATCACAACCTTAAACGTTTGTCAAGCGTATACCCTAAAACGGACCCGTGACCCGGATTATCACGTGACCTTAAGGCCTCATATTTCCAAAGAATATGCTGAGCCGAGCAAGCCGGCTGATGAACTTATCTACCTGAACCCAACCAGTGAGTATGCACCGGGTTTGGAGGACACACTAATCTTGACCATGAAGGGAATTGCTGCAGGAATGCAGAACACCGGTTAG | 2931 | 44.73 | MTNKLTLIIPSSFHILRIWGKIEGAFLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKETVQECYELSAEYEGKRDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIKLKKGDFADEANATTESDIEETLKKLVYKLNKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTQPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCTDELRDRAEELFRTARRDVKHYIEFWKQVPPTEPYRVILGDVRDKLYNTRERSRHLLAHDISDIPEEAVYTNVEQFLEPLELCYRSLCACGDRVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYRDWPEEKRQDWLLAELSGKRPLFGSDLPKTEEIKDVLDTFGVLAELPSDCFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAMARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELKNVAKEFGVKLVMFHGRGGTVGRGGGPTHLAILSQPAETIQGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRELMDQMAIVATEQYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKQVIQKDSKNLKMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWSFGESLRANYEETKDYLLKIAGHKDLLEGDPYLKQRLKLRDSYITTLNVCQAYTLKRTRDPDYHVTLRPHISKEYAEPSKPADELIYLNPTSEYAPGLEDTLILTMKGIAAGMQNTG | 976 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00357 | 976 | Pfam | Phosphoenolpyruvate carboxylase | 45 | 976 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | SUPERFAMILY | Phosphoenolpyruvate-pyruvate domain | 44 | 976 | IPR015813 | GO:0003824(InterPro) | |
| Dapi7g00357 | 976 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 1. | 179 | 190 | IPR018129 | - | |
| Dapi7g00357 | 976 | ProSitePatterns | Phosphoenolpyruvate carboxylase active site 2. | 602 | 614 | IPR033129 | - | |
| Dapi7g00357 | 976 | Gene3D | Phosphoenolpyruvate-pyruvate domain | 319 | 454 | - | - | |
| Dapi7g00357 | 976 | PANTHER | PHOSPHOENOLPYRUVATE CARBOXYLASE | 38 | 976 | IPR021135 | GO:0005829(PANTHER)|GO:0006099(InterPro)|GO:0008964(PANTHER)|GO:0008964(InterPro)|GO:0009507(PANTHER)|GO:0015977(InterPro)|GO:0048046(PANTHER)|GO:0048366(PANTHER) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 178 | 191 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 642 | 671 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 451 | 471 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 600 | 620 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 291 | 306 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 231 | 247 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | PRINTS | Phosphoenolpyruvate carboxylase signature | 774 | 800 | IPR021135 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | Hamap | Phosphoenolpyruvate carboxylase [ppc]. | 34 | 976 | IPR022805 | GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro) | |
| Dapi7g00357 | 976 | FunFam | Phosphoenolpyruvate carboxylase 1 | 319 | 454 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00357 | K01595 | phosphoenolpyruvate carboxylase [EC:4.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 74085 | Dapi12g01370 | Dapi7g00357 | |
| 75966 | Dapi17g01074 | Dapi7g00357 | |
| 76542 | Dapi18g00869 | Dapi7g00357 | |
| 81289 | Dapi2g00648 | Dapi7g00357 | |
| 251675 | Dapi7g00357 | Dapi23g00377 | |
| 381615 | Dapi16g01827 | Dapi7g00357 | |
| 387068 | Dapi23g00377 | Dapi7g00357 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr17:39350086 | Dapi7g00357 | Dapi-Chr7:7692595 | dispersed | |
| Dapi | Dapi-Chr1:44441647 | Dapi7g00357 | Dapi-Chr7:7692595 | dispersed | |
| Dapi | Dapi-Chr21:29878912 | Dapi7g00357 | Dapi-Chr7:7692595 | dispersed | |
| Dapi | Dapi-Chr5:35366367 | Dapi7g00357 | Dapi-Chr7:7692595 | dispersed | |
| Dapi | Dapi-Chr12:96779052 | Dapi7g00357 | Dapi-Chr7:7692595 | wgd | |
| Dapi | Dapi-Chr16:66878164 | Dapi7g00357 | Dapi-Chr7:7692595 | wgd | |
| Dapi | Dapi-Chr18:21828964 | Dapi7g00357 | Dapi-Chr7:7692595 | wgd | |
| Dapi | Dapi-Chr2:12588961 | Dapi7g00357 | Dapi-Chr7:7692595 | wgd | |
| Dapi | Dapi-Chr23:8389023 | Dapi7g00357 | Dapi-Chr7:7692595 | wgd | |
| Dapi | Dapi-Chr32:76604490 | Dapi7g00357 | Dapi-Chr7:7692595 | wgd |